Pairwise Alignments

Query, 664 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 639 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  214 bits (545), Expect = 1e-59
 Identities = 146/534 (27%), Positives = 263/534 (49%), Gaps = 17/534 (3%)

Query: 136 WNSDPAPNYYD-----QSWYKGGLASPRGQCAWAAAYKDDASQEPRTNCAMAIQRDGVPY 190
           +  DP+ N  D     + WYK   A+  G+      Y     Q      A  ++  G   
Sbjct: 117 FRQDPSLNTADYDPRVRGWYKEAKAA--GKPITTEPYVSVTMQTLVVTLAEPVRYQGQLI 174

Query: 191 GVATIDVTLGFFNDLVASKEKDIGGQMLIVEGDGKIISNSTRISSPVVLKNISELTGTSA 250
           GVA  ++ L      V + E    G  ++V   GKI+++ T+    ++LK   E++    
Sbjct: 175 GVAASNLALDKLIKDVLAIEVPGKGYAILVNQKGKIVAHPTQ---DLILKPTEEMSAQLT 231

Query: 251 FAAQVSKA-LAQRDQALQRSEFDNQGVASTFYMRPIAGTPWFLATALPTALITAQRDDVL 309
               +SK  +A +D +L +   D  G         +A T W L   +   ++    +D+L
Sbjct: 232 ----ISKLNIAAKDHSLFQLSMD--GRDKVLMAEEVANTDWLLVMVMDKGVLEQPLNDML 285

Query: 310 GTLALLQIPMVLLLVLLAVYAIRQLVQRMKSLKTNIDALSTGDADLTRRITIRAEDELGA 369
                + + ++L++ LL  + + + +  + ++   +  ++ GD DLTRR+ +R++DE+G 
Sbjct: 286 MVQIGIGLGILLVMALLTSWFVARQLNELGNIANALADIAEGDGDLTRRLDVRSQDEVGL 345

Query: 370 IGHSVNRFIVYLQNMIGEVTQATGAMSSSLEQLQRTSAHTNQILVRHASETDQTVTAITE 429
           +    N+F+  L  M+  V + + A++   +    ++   ++ +     E     TA+TE
Sbjct: 346 LADKFNKFVDRLHQMVKNVREVSVALTQGADHAAASATQASKRIRTQQDEITMVATAVTE 405

Query: 430 MSSTADTVAQNAAETAAFTQRANEHADRSRVVVGEASNSVSALIGEVSSATHSVENMRQD 489
           M+S    +A NA  TA    ++ +  +     + ++  S+  L  E++ A   +  +   
Sbjct: 406 MASATAEIASNAENTAKNATQSVQLGEDGFAQMQQSKQSIDQLAQELTGAVRIISELEVH 465

Query: 490 AARITETLGVIGAIAGQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAARTQASTSQI 549
           A  I+  L  I  IA QTNLLALNAAIEAARAGEQGRGFAVVADEVR L+ RT AST +I
Sbjct: 466 ANEISTILSTIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLSQRTHASTEEI 525

Query: 550 NEMLTRLTAGVSSSVAAMENTQASCQSAADATARVNTGLDEMAGSVSHINNLSTQIATAA 609
              +  L    +++V+ M  +    +++     +    L  ++ ++  I++++TQIA+AA
Sbjct: 526 QTKIAGLQKVTTTAVSVMTESHKLVETSVADVNQTGASLQAISEAIQQISDMATQIASAA 585

Query: 610 EQQSAVTEEINRSMVQIRQMVEELVQSGHATETNTQSLLDANGRVIALMGRFKV 663
           E+QS VT +IN +   +R++ ++L +    +    +SL      +   + RFK+
Sbjct: 586 EEQSLVTADINVNTESVREVSDQLAEEAQQSVQQAKSLHAMAQELNKEISRFKL 639