Pairwise Alignments

Query, 664 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 643 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  324 bits (831), Expect = 7e-93
 Identities = 185/420 (44%), Positives = 268/420 (63%), Gaps = 8/420 (1%)

Query: 253 AQVSKALAQRDQALQRSE-----FDNQGVASTFYMRPIAGTP---WFLATALPTALITAQ 304
           +QVS +  + +    R E     F   G+    Y + +  T    W L   +  A   A 
Sbjct: 224 SQVSPSFREMEAGFHRQESGHLSFPYLGIEFDGYYKRVNLTDDMYWTLMVFVDKATALAD 283

Query: 305 RDDVLGTLALLQIPMVLLLVLLAVYAIRQLVQRMKSLKTNIDALSTGDADLTRRITIRAE 364
            D  +       I ++ + V + ++ I Q+ + +  LK  +  L+ G  DLTRR+ +   
Sbjct: 284 VDVAVANAITTGIVLIGISVGVIIFIINQIYKPLLRLKVAVLDLAQGSGDLTRRLEVNGN 343

Query: 365 DELGAIGHSVNRFIVYLQNMIGEVTQATGAMSSSLEQLQRTSAHTNQILVRHASETDQTV 424
           D+L  I    NRF   LQNM+ +++ AT  +SSS+EQL +T+    Q+L+ H+SETDQ V
Sbjct: 344 DDLAQISEGFNRFSGNLQNMMLQISDATQIISSSIEQLSQTAKENEQMLISHSSETDQVV 403

Query: 425 TAITEMSSTADTVAQNAAETAAFTQRANEHADRSRVVVGEASNSVSALIGEVSSATHSVE 484
           TAIT+MS +A TVA++  ++   T+ A++ A +S V+V  A ++V++L+ +V + + S+ 
Sbjct: 404 TAITQMSESARTVAESVTQSNQITEAASKEAQQSLVIVNNAVSTVTSLVNDVENMSESIS 463

Query: 485 NMRQDAARITETLGVIGAIAGQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAARTQA 544
           NM +DA +I+E L VIGAI+ QTNLLALNAAIEAARAGEQGRGFAVVADEVRALAARTQ 
Sbjct: 464 NMNRDANKISEVLSVIGAISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAARTQN 523

Query: 545 STSQINEMLTRLTAGVSSSVAAMENTQASCQSAADATARVNTGLDEMAGSVSHINNLSTQ 604
           ST++I++MLT+L  G  S V AME T+  CQ+ AD T+ V+  L+ M+ SVS I++LSTQ
Sbjct: 524 STTEISDMLTKLLEGTDSVVGAMERTKQQCQTTADKTSEVSGSLNMMSASVSDIDDLSTQ 583

Query: 605 IATAAEQQSAVTEEINRSMVQIRQMVEELVQSGHATETNTQSLLDANGRVIALMGRFKVR 664
           IA A EQQS V  E++R+M+ IR++VE LV SG  T   T+SL  +N  +  L+G+FK+R
Sbjct: 584 IAAATEQQSTVAAELSRNMLSIREIVESLVVSGRQTVGATESLSHSNHELEQLVGKFKLR 643