Pairwise Alignments

Query, 664 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 548 a.a., methyl-accepting chemotaxis protein HlyB from Vibrio cholerae E7946 ATCC 55056

 Score =  200 bits (508), Expect = 2e-55
 Identities = 119/344 (34%), Positives = 188/344 (54%), Gaps = 1/344 (0%)

Query: 320 VLLLVLLAVYAIRQLVQRMKSLKTNIDALSTGDADLTRRITIRAEDELGAIGHSVNRFIV 379
           +++  + ++  I  L  R+  LK  + + +  +  L  R+ +   DEL  IG S N FI 
Sbjct: 206 LIISFITSLVIITNLRSRVAYLKDRMSS-AAANLSLRTRLELDGNDELCDIGKSFNAFID 264

Query: 380 YLQNMIGEVTQATGAMSSSLEQLQRTSAHTNQILVRHASETDQTVTAITEMSSTADTVAQ 439
            + + I EV + +  +++    + + +  T          T Q  TAI E+ +T   +A 
Sbjct: 265 KVHHSIEEVAENSKELATMASSVSQRAHMTQSNCASQRDRTVQVATAIHELGATVSEIAS 324

Query: 440 NAAETAAFTQRANEHADRSRVVVGEASNSVSALIGEVSSATHSVENMRQDAARITETLGV 499
           NAA  A   ++A  H+   + VVGE  N +  L+ E+ +AT  V ++      I+ TL  
Sbjct: 325 NAAMAADVAKQATLHSGEGKKVVGEVQNRIQTLVNELDNATQVVSSLATQINGISSTLDT 384

Query: 500 IGAIAGQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAARTQASTSQINEMLTRLTAG 559
           I +I+ QTNLLALNAAIEAARAGEQGRGFAVVADEVR LA+R+ AST +I +++ RL   
Sbjct: 385 IRSISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRSAASTEEIQQVINRLQTE 444

Query: 560 VSSSVAAMENTQASCQSAADATARVNTGLDEMAGSVSHINNLSTQIATAAEQQSAVTEEI 619
            + +V AME  ++      + +A+ N  L E+   +  IN+ + Q+ATA E+QS V E+I
Sbjct: 445 STRAVEAMEKGRSQSDVVVEFSAKANQSLTEINSQIDQINDQNIQVATATEEQSTVVEDI 504

Query: 620 NRSMVQIRQMVEELVQSGHATETNTQSLLDANGRVIALMGRFKV 663
           NR++  I Q+  E           + SL   + ++  L+G F++
Sbjct: 505 NRNVEDINQLTTETSHVADELSRASASLQRLSSQLDKLVGSFEL 548