Pairwise Alignments

Query, 664 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 553 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  219 bits (558), Expect = 3e-61
 Identities = 132/360 (36%), Positives = 203/360 (56%)

Query: 304 QRDDVLGTLALLQIPMVLLLVLLAVYAIRQLVQRMKSLKTNIDALSTGDADLTRRITIRA 363
           Q +  L TLA + + +V+L+ ++A+   R +++ ++    +I + ++GDADLT R+   +
Sbjct: 194 QLEQGLYTLAGITLLIVILVSVMAIMINRSIMRPLELFDNSISSFASGDADLTARMEKFS 253

Query: 364 EDELGAIGHSVNRFIVYLQNMIGEVTQATGAMSSSLEQLQRTSAHTNQILVRHASETDQT 423
             E   + H+ NRF+  LQN+I  V Q    +      + + +   + +      ET+Q 
Sbjct: 254 VPEFHKLSHNFNRFVESLQNIIKRVNQVGQQVVEETNAMSQRATQVDHLASNQREETEQV 313

Query: 424 VTAITEMSSTADTVAQNAAETAAFTQRANEHADRSRVVVGEASNSVSALIGEVSSATHSV 483
            TA+TEM++TA  ++ NA   A   + A ++A     +V  A+ SV AL  EV+ A+  +
Sbjct: 314 ATAMTEMTTTAQEISNNANNAAQSAKDAEDNATDVHNIVNAAARSVQALAEEVADASSVI 373

Query: 484 ENMRQDAARITETLGVIGAIAGQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAARTQ 543
             +  D   IT +L VI  IA QTNLLALNAAIEAARAGEQGRGFAVVADEVR LA+RTQ
Sbjct: 374 AKLEGDVNNITSSLAVIQDIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRKLASRTQ 433

Query: 544 ASTSQINEMLTRLTAGVSSSVAAMENTQASCQSAADATARVNTGLDEMAGSVSHINNLST 603
            ST QI+ M+ +L AG  ++V AME++Q    +           L ++  S+  I +++ 
Sbjct: 434 ESTQQIHTMIQQLKAGSDAAVKAMESSQQRSITTVREANAAAEALQKIQASIGTIMDMNA 493

Query: 604 QIATAAEQQSAVTEEINRSMVQIRQMVEELVQSGHATETNTQSLLDANGRVIALMGRFKV 663
            IATA E+QS V +EI++ +V I     E     +     +Q+L      +  L+ RFKV
Sbjct: 494 LIATATEEQSIVGQEISQRIVVISDQSSESADLANQNRQGSQTLNGRAHELYELVARFKV 553