Pairwise Alignments

Query, 664 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 706 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  214 bits (546), Expect = 8e-60
 Identities = 145/501 (28%), Positives = 248/501 (49%), Gaps = 21/501 (4%)

Query: 177 TNCAMAIQRDGVPYGVATIDVTLGFFNDLVASKEKDIGGQMLIVEGDGKII---SNSTRI 233
           T+ ++ I  DGV  G   ID+TL     +    + ++       +G GK+     N+  +
Sbjct: 212 TSLSVPILIDGVAIGFYGIDLTLAPLIGITQKSDNNL------FDGQGKVSIVSENNALV 265

Query: 234 SSPVVLKNISELTGTSAFAAQVSKALAQRDQALQRSEFDNQGVASTFYMRPIAGTPWFLA 293
           +S      + E   +   +     +L Q  Q   +   D Q +   F    +A   W + 
Sbjct: 266 ASDAAFLTLGETFQSENLSRSTVSSLLQAGQVNTQWSEDGQWLV-VFAPIKVANQNWGII 324

Query: 294 TALPTA-----------LITAQRDDVLGTLALLQIPMVLLLVLLAVYAIRQLVQRMKSLK 342
             +P             L+T Q +  + +  ++   MV++ +L+      +LV+ ++++ 
Sbjct: 325 FEMPRQSVMQDAEQLDILLTEQLERGIRSELMVGTLMVVVGLLVVTLMAMRLVRPIRAVA 384

Query: 343 TNIDALSTGDADLTRRITIRAEDELGAIGHSVNRFIVYLQNMIGEVTQATGAMSSSLEQL 402
             +  +S+G+ DLT+R+ + + DE+G +    N F+  LQ +I  V   TG + S+ EQ+
Sbjct: 385 ERLQDISSGEGDLTQRLQVNSADEIGQLAQGFNLFMDKLQPIIRRVVDNTGQVVSTTEQV 444

Query: 403 QRTSAHTNQILVRHASETDQTVTAITEMSSTADTVAQNAAETAAFTQRANEHADRSRVVV 462
           + T   T +       E D   TA  EM+ T+  V +NA         A   A     V+
Sbjct: 445 KSTVESTRRSSEAQFKEVDSVATAAEEMTQTSAHVVENAQRAVNAASDAQRAAQTGDEVI 504

Query: 463 GEASNSVSALIGEVSSATHSVENMRQDAARITETLGVIGAIAGQTNLLALNAAIEAARAG 522
             +   ++ L+  ++ A   VE + ++   I E L VI  I+ QTNLLALNAAIEAARAG
Sbjct: 505 RHSQMQMNQLVDRMNLAVPVVEELARNNTGIIEILSVIEGISEQTNLLALNAAIEAARAG 564

Query: 523 EQGRGFAVVADEVRALAARTQASTSQINEMLTRLTAGVSSSVAAMENTQASCQSAADATA 582
           EQGRGFAVVADEVR+LA+RTQAS  +I  ++ ++  G    V A++ +  + Q+ A+  A
Sbjct: 565 EQGRGFAVVADEVRSLASRTQASVGEIRSVINKVELGTQDVVKAIQGSNETAQATAEQVA 624

Query: 583 RVNTGLDEMAGSVSHINNLSTQIATAAEQQSAVTEEINRSMVQIRQMVEELVQSGHATET 642
              T L+ +  ++  IN +S QI  AA+ Q  V+ ++ +S+V IR +  +++    A+E 
Sbjct: 625 DAVTQLNRVFSAIHAINEMSHQIVQAAQDQQTVSAQVTQSVVNIRDLSAQILSETEASEK 684

Query: 643 NTQSLLDANGRVIALMGRFKV 663
             + +   +     L+G+FKV
Sbjct: 685 VGEQIARLSFEQQTLVGQFKV 705