Pairwise Alignments

Query, 664 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 631 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  224 bits (572), Expect = 7e-63
 Identities = 151/534 (28%), Positives = 268/534 (50%), Gaps = 16/534 (2%)

Query: 136 WNSDPAPNYYD-----QSWYKGGLASPRGQCAWAAAYKDDASQEPRTNCAMAIQRDGVPY 190
           + S P  N  D     + WYK   A+  G+     AY D  +       A  ++ +G   
Sbjct: 108 YRSHPERNRADYDPRTRPWYKD--AASAGKQIITTAYSDAITGALLVTIAEPVRLNGNMS 165

Query: 191 GVATIDVTLGFFNDLVASKEKDIGGQMLIVEG-DGKIISNSTRISSPVVLKNISELTGTS 249
           GV   DV +      V S +     Q ++++G +G  +++  +    ++LK ++ L+  S
Sbjct: 166 GVVGADVLIDQLIADVISMDAGKNAQTMLIDGQNGSFLAHPDK---SLLLKPVTTLS--S 220

Query: 250 AFAAQVSKALAQRDQALQRSEFDNQGVASTFYMRPIAGTPWFLATALPTALITAQRDDVL 309
           A   +  +  A + + L        GV   F+   +  TPW+ A  + +    A   ++L
Sbjct: 221 ALDMRTIERAANQGELLA---LKLNGVEKFFFFTAVPDTPWYFAVQMDSDTEYASHSELL 277

Query: 310 GTLALLQIPMVLLLVLLAVYAIRQLVQRMKSLKTNIDALSTGDADLTRRITIRAEDELGA 369
             L    + + +++V++  + +  L + +  +   ++ +++GDADLT+R+  R++DE+G 
Sbjct: 278 TGLITTALLITVIVVVIVSWLVSFLFRDLGRVSKALEEIASGDADLTQRLEPRSDDEVGQ 337

Query: 370 IGHSVNRFIVYLQNMIGEVTQATGAMSSSLEQLQRTSAHTNQILVRHASETDQTVTAITE 429
           +  + N F+  +  M+ +++  + A++   +     +   +  +     E +   TAI E
Sbjct: 338 LASNFNTFVSNMHTMVLKLSHVSAALAQQSKVTAAQAEERSSRIRLQQDEINMVATAINE 397

Query: 430 MSSTADTVAQNAAETAAFTQRANEHADRSRVVVGEASNSVSALIGEVSSATHSVENMRQD 489
           M++    +A NA  TA     A          V +   S+ +L  EV  AT  ++ +   
Sbjct: 398 MAAATQEIAGNADHTAQNAGEAVTACVHGAGQVTQTQRSIQSLAEEVQVATEVIQELEAH 457

Query: 490 AARITETLGVIGAIAGQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAARTQASTSQI 549
             +I+  L  I  IA QTNLLALNAAIEAARAGEQGRGFAVVADEVR L+ RT AST +I
Sbjct: 458 GHQISTILSTIQNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLSQRTHASTKEI 517

Query: 550 NEMLTRLTAGVSSSVAAMENTQASCQSAADATARVNTGLDEMAGSVSHINNLSTQIATAA 609
            +M+  L A    +V  M++++    ++ D     +  L+++  +V  I++++TQIA+AA
Sbjct: 518 QQMIETLQATTGKAVGIMDDSRRLADTSVDDANEASVSLEQIHKTVERISDMATQIASAA 577

Query: 610 EQQSAVTEEINRSMVQIRQMVEELVQSGHATETNTQSLLDANGRVIALMGRFKV 663
           E+Q++VT EI R+ V IR +  +L Q  H+       L + +  +   + RFK+
Sbjct: 578 EEQASVTSEITRNTVGIRDVSNDLAQEAHSAAEQAAELSELSHELEQEIRRFKL 631