Pairwise Alignments

Query, 664 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 536 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  200 bits (509), Expect = 1e-55
 Identities = 118/345 (34%), Positives = 199/345 (57%), Gaps = 2/345 (0%)

Query: 319 MVLLLVLLAVYAIRQLVQRMKSLKTNIDALSTGDADLTRRITIRAEDELGAIGHSVNRFI 378
           + L+++ L V   R ++Q + ++K  +  ++ GD  LT +I +  +DELG +   +N  I
Sbjct: 194 VTLVMIGLGVVISRAVIQPLDTIKDVMKKVAQGD--LTAQIPVLGKDELGIVAQRINNSI 251

Query: 379 VYLQNMIGEVTQATGAMSSSLEQLQRTSAHTNQILVRHASETDQTVTAITEMSSTADTVA 438
             + + + E  Q+  +++ +  ++  ++  T+Q +V    +  Q  TA+ +M++T   VA
Sbjct: 252 AAVHDALVESVQSASSVAEAAIRIASSAEETSQAVVSQRDQLSQLATAMNQMTATVADVA 311

Query: 439 QNAAETAAFTQRANEHADRSRVVVGEASNSVSALIGEVSSATHSVENMRQDAARITETLG 498
            +A +TA  T  A++ A+     V  + +S+ AL  E+  AT  V  +++   +I+E   
Sbjct: 312 GHAEDTARDTLDASKEANLGDKDVHSSVDSIRALSVELGVATDQVNKLKEGVMQISEVTS 371

Query: 499 VIGAIAGQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAARTQASTSQINEMLTRLTA 558
           VI  I+ QTNLLALNAAIEAARAG+QGRGFAVVADEVR LA+RT  ST +I  M+ RL  
Sbjct: 372 VISGISEQTNLLALNAAIEAARAGDQGRGFAVVADEVRNLASRTHHSTDEIQTMINRLQQ 431

Query: 559 GVSSSVAAMENTQASCQSAADATARVNTGLDEMAGSVSHINNLSTQIATAAEQQSAVTEE 618
              S+ +AM+ +QA   ++        + L  +   + H+++ +TQIATAAE+QSAV EE
Sbjct: 432 LAVSTASAMQKSQALAANSVATAENAGSDLSLIVNHIQHVSDKATQIATAAEEQSAVAEE 491

Query: 619 INRSMVQIRQMVEELVQSGHATETNTQSLLDANGRVIALMGRFKV 663
           +NR++  I     E+ Q+       ++ L D + ++   +  FK+
Sbjct: 492 MNRNVSGINDAALEMSQAATYLAEESEKLADLSRQLDQKLTAFKL 536