Pairwise Alignments

Query, 664 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 564 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  241 bits (616), Expect = 5e-68
 Identities = 137/358 (38%), Positives = 224/358 (62%), Gaps = 1/358 (0%)

Query: 306 DDVLGTLALLQIPMVLLLVLLAVYAIRQLVQRMKSLKTNIDALSTGDADLTRRITIRAED 365
           D ++  + L  + +V  ++ ++V   R +   ++ + +++ A++ G  DLT RI + ++D
Sbjct: 208 DQMISAIGLSVVGLVFTIIAVSVLVSRGIAP-LQHVVSSLQAVAAGGGDLTARIKVESQD 266

Query: 366 ELGAIGHSVNRFIVYLQNMIGEVTQATGAMSSSLEQLQRTSAHTNQILVRHASETDQTVT 425
           E+G +  + N F+  L  ++ ++  +   + ++ ++L + ++  +  +  H  ETD+ V 
Sbjct: 267 EIGDVAKAFNAFMDKLHPLMTDIRASANTVEAAAQELDQQTSQASHKMDGHCLETDKVVA 326

Query: 426 AITEMSSTADTVAQNAAETAAFTQRANEHADRSRVVVGEASNSVSALIGEVSSATHSVEN 485
           A+TEMS+TA  VA N   TA   + AN     ++  V  A + +  L+ EV+  + +V +
Sbjct: 327 AVTEMSATAREVASNTYSTAQAIESANSQIAVAQKEVNLAIDGIGELVNEVNQTSAAVGD 386

Query: 486 MRQDAARITETLGVIGAIAGQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAARTQAS 545
           + Q AA+IT+ L VIG IA QTNLLALNAAIEAARAGEQGRGFAVVADEVR+LA+RTQ S
Sbjct: 387 LSQQAAKITQVLKVIGDIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTQNS 446

Query: 546 TSQINEMLTRLTAGVSSSVAAMENTQASCQSAADATARVNTGLDEMAGSVSHINNLSTQI 605
           T +I EML  L  GVS +V +M  +Q   +  A  + ++   L  ++ +VS I+++  Q 
Sbjct: 447 TKEIGEMLNALHQGVSKAVQSMNISQERGEKTALESVQIKESLAGISKAVSLIHDMGIQT 506

Query: 606 ATAAEQQSAVTEEINRSMVQIRQMVEELVQSGHATETNTQSLLDANGRVIALMGRFKV 663
           A+AAEQQSAV E+IN+++V I+Q+V EL +S   TE+ + SL  +  ++  L+G FK+
Sbjct: 507 ASAAEQQSAVAEDINQNLVAIQQIVNELSESFKQTESVSASLSHSGQQMGTLVGHFKL 564