Pairwise Alignments

Query, 301 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 328 a.a., AraC family transcriptional regulator from Sinorhizobium meliloti 1021

 Score = 97.4 bits (241), Expect = 4e-25
 Identities = 87/311 (27%), Positives = 130/311 (41%), Gaps = 16/311 (5%)

Query: 3   SSSVLVDWL---LDSLELDTSLFHMGRYCGDWHASTHGLASASFHLIVQGRCWLHI-DGD 58
           SSS   D+L   L  L LD   +        W  S     +A FH I  G CWL + DGD
Sbjct: 9   SSSASEDFLSELLRGLRLDGVDYVRCELTAPWGISFPAQEAARFHFIC-GDCWLRVADGD 67

Query: 59  TTAHRLDNGDAVFLLRDLEYRLSGEP-------TAAGAQECPRVPMVPLDSAASDGVGLV 111
                L  GDAV L R   + L+  P        A   +E                  L 
Sbjct: 68  WI--ELKRGDAVLLPRGGAHALASAPGEKLSPLEAYSVEEVCHCVYDVCGGGRGKTTILF 125

Query: 112 CGFFHFQSGLSAMIVDTLPAWIILRAGDPSLTAARNLFELILQECERLPAPSSALLERLC 171
           CG   F       ++  +P  + + A   S  A  ++ + + +E       S  +L RL 
Sbjct: 126 CGSLRFNMDAMHPLLRMMPDVMRIDALTASEPAIPHMLDAMAREVGASRVGSGGVLARLA 185

Query: 172 HLLFLYVLRQQVLDNSA-LGGLAALARQPAFADLLEQLIARPADAWTLESMAACTGLSRS 230
            +L   ++R  V        G  A  R P    ++  +   P   WT++S+A   G SRS
Sbjct: 186 DVLAALIIRSWVEHGCGNTNGWVAAVRHPGLGRVIAAMHLDPEKTWTVDSLAKLMGASRS 245

Query: 231 AFFKRFNELCGQSPGQVLLMMRMRHACQ-LFKQNQTVADVAVAVGYQSVAAFTRAFHKVT 289
            F ++F  + G++P + L  +RM  A Q L +    ++ VA  +GY S A+F+RAF +V 
Sbjct: 246 GFAQQFAAVVGETPARYLTQVRMHQARQWLTRDRMRISVVARRLGYDSEASFSRAFKRVI 305

Query: 290 GQQPGAYRKAQ 300
           G  P  YR ++
Sbjct: 306 GLPPSHYRGSE 316