Pairwise Alignments

Query, 301 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 306 a.a., transcriptional regulator GcvA from Vibrio cholerae E7946 ATCC 55056

 Score =  169 bits (427), Expect = 1e-46
 Identities = 103/297 (34%), Positives = 162/297 (54%), Gaps = 4/297 (1%)

Query: 2   RDLPPTATLRAFEVATRHATFTSASEELHVTQSAVSHQLKHLEDLWGLQLFQR-GKSLRL 60
           R LPP  +L+ FE A RH +FT A+EEL VTQ+AVSHQ+K LE+  GL+LF+R  +SL L
Sbjct: 3   RRLPPLNSLKVFEAAARHLSFTRAAEELFVTQAAVSHQIKALEEFLGLKLFRRRNRSLLL 62

Query: 61  TPAGAALAPIVREFFVNLETTLTDLREQKGRVRLKVSTTYSFALKWLLPRLPGLSQQHPE 120
           T  G +    +++ F +L      L E+  +  L +S   SFA++WL+PRL   +QQ P+
Sbjct: 63  TEEGQSYFLDIKDIFSSLAEATDKLLERSEKGALTISLPPSFAIQWLVPRLADFNQQEPD 122

Query: 121 ILITLETSDKAINFSSADSDVAIRLGNGHYPALHSEFMLREQIFPVASPDLLNRFGAPHE 180
           I + ++  D      + D DVAI  G G +P L ++ + +E + P+ SP LL     P E
Sbjct: 123 IDVRIKAVDMDEGSLTDDVDVAIYYGRGSWPGLRADKLYQEFLIPLCSPALL-LGNKPME 181

Query: 181 PAELLRYPLLMRDGADLVPKWEAWFEHVGVSVAALKESVRFADTNMTIEAALLGQGIALA 240
               L Y  L+ D +     W+ + +  G+    +     F+ + M ++AA  GQG+AL 
Sbjct: 182 KLSDLAYHTLLHDTSR--KDWKQFAKENGLDNVNVNHGPIFSHSTMVLQAAAHGQGVALG 239

Query: 241 RSGHVEAEINDGSLVRLFDVPFASPVAYFFVCPKGIETQPHIVSFRNWLLAESTQAQ 297
            +   + EI+ G L+  FD    +  A++ VC +       I +FR+W+L ++   Q
Sbjct: 240 NNVLAQPEIDAGRLIAPFDEVLMTNNAFYVVCHEKQADMGRIATFRDWMLKKARSEQ 296