Pairwise Alignments

Query, 301 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 303 a.a., putative glycine cleavage system transcriptional activator from Phaeobacter inhibens DSM 17395

 Score =  142 bits (358), Expect = 1e-38
 Identities = 92/295 (31%), Positives = 143/295 (48%), Gaps = 8/295 (2%)

Query: 2   RDLPPTATLRAFEVATRHATFTSASEELHVTQSAVSHQLKHLEDLWGLQLFQRG-KSLRL 60
           R LP  A LRA E   R  + ++A++EL +TQ AVS QL+ LE   G+ L +R  K L L
Sbjct: 6   RFLPSIAALRALEALDRLGSASAAADELALTQGAVSRQLQALERQLGVDLVRRDQKRLTL 65

Query: 61  TPAGAALAPIVREFFVNLETTLTDLREQKGRVRLKVSTTYSFALKWLLPRLPGLSQQHPE 120
           +P     A  +R+    +  +   ++       L ++   +F ++WL+PRLP  ++ HP+
Sbjct: 66  SPEAQTYAADIRQALNQIAQSTLRVQAAPLAGSLNLAILPAFGMRWLMPRLPEFARLHPD 125

Query: 121 ILITLETSDKAINFSSADSDVAIRLGNGHYPALHSEFMLREQIFPVASPDLL--NRFGAP 178
           + I + T  +  NF S   D AI  G   +P   +  +  EQ+ PV +PDLL   +   P
Sbjct: 126 VTINMSTRLEPFNFVSEGFDAAIHFGTADWPGTQALLLKHEQMLPVCAPDLLEGRQISTP 185

Query: 179 HEPAELLRYPLLMRDGADLVPKWEAWFEHVGVSVAALKESVRFADTNMTIEAALLGQGIA 238
            + A L    +  R  A     W+ WFE   +++        +       +AAL G G+A
Sbjct: 186 VDIAALPLLHIQTRPQA-----WQHWFESHDIALQDGLSGTMYDQFATITQAALHGLGVA 240

Query: 239 LARSGHVEAEINDGSLVRLFDVPFASPVAYFFVCPKGIETQPHIVSFRNWLLAES 293
           L     VE ++  G L+ L      SP AYF V P+     P ++ FRNWL  ++
Sbjct: 241 LMPDYLVEQDLATGRLIALHPTATESPGAYFLVWPEARAKDPALIKFRNWLAGQA 295