Pairwise Alignments

Query, 412 a.a., FAD-dependent oxidoreductase from Pseudomonas simiae WCS417

Subject, 421 a.a., D-amino acid dehydrogenase small subunit from Vibrio cholerae E7946 ATCC 55056

 Score =  127 bits (319), Expect = 6e-34
 Identities = 113/411 (27%), Positives = 185/411 (45%), Gaps = 20/411 (4%)

Query: 5   DIVVVGAGIIGVACALQLARQGQQVWVVDQQEPGMG-ASYGNAGHLATEQVFPIADLSIL 63
           +++V+G+G++G+  A  LA+ G  V VVD+Q  G    S+ NAG ++     P A   I 
Sbjct: 3   EVLVLGSGVVGLTSAWYLAQAGHDVTVVDRQPRGAEETSFANAGQISYGYSSPWAAPGIP 62

Query: 64  KRLPGMLLDPMGPLRLDWKYLPHALPWFLRLLLNLRPASYQRTVAGIRTLNEGSLGAWQR 123
           ++    +L+   PL++     P  L W  ++LLN + + YQ   + +  +   S    + 
Sbjct: 63  QKALKWMLEKHAPLKIQPSLDPALLSWMGKMLLNCQLSRYQVNKSRMLAIANYSRECLKA 122

Query: 124 LLHSIGHPQLLREDGSLLVFERADSRDALNALQQRMQQQQVPVDFWSGDAIRQAAPQLS- 182
           L  +       R+ G+L VF       A+    Q + Q  V  +  +        P L+ 
Sbjct: 123 LNQTYSLDYQGRQRGTLQVFRDEKQLTAIEKDMQLLAQSGVRFELLNVAQCLTHEPGLAP 182

Query: 183 --DNLQGGLFFPG--TGHFLDPYHVVCELVHAAKASGVQF-----LKRQVLDGRVDAHGV 233
             + L GGL+ P   TG   D Y    +L   AK  GV+F     +++ V +G+     +
Sbjct: 183 VQEKLVGGLWLPDDETG---DCYLFCQQLTELAKQQGVRFHFDCHIQQLVCEGKKI---I 236

Query: 234 SLTTDQGPLTARQVLIACGAHSARLTAALTGKKVPLDTERGYHLMLPHEHNRLPFAVTSL 293
            + TD G L A   ++A G++S  L   L G ++P+   +GY L LP    +     T +
Sbjct: 237 GVQTDLGLLKADAYVVALGSYSTSLLKPL-GIEIPVYPVKGYSLTLPIIDEKFAPQSTVM 295

Query: 294 ER--KFIMTPMADGLRLAGTVEFAGLDRPANMARAWQLHRLSKGLFREELSAEGATPWMG 351
           +   K  +T  +D +R+AGT E AG D     AR   +  +++ LF           W G
Sbjct: 296 DETYKVALTRFSDRIRVAGTAELAGFDPAIPEARKATIEMVARDLFPHGGDFAKGQFWTG 355

Query: 352 FRPSLPDSLPVIDRVCDGKVLLAFGHQHLGLTQAAVTAEWVGALARTGQAP 402
           FRP  PD  P+I       +    GH  LG T A  +A  +  +   G++P
Sbjct: 356 FRPMTPDGTPIIGATPYTNLYTNTGHGTLGWTMACGSASILADVLTHGESP 406