Pairwise Alignments

Query, 316 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 314 a.a., DNA-binding transcriptional regulator DsdC from Vibrio cholerae E7946 ATCC 55056

 Score =  160 bits (405), Expect = 4e-44
 Identities = 98/303 (32%), Positives = 160/303 (52%), Gaps = 10/303 (3%)

Query: 2   YEALGDLSLDLLRAFEAAARHRSFTAAAMELGTTQPAISQQIKRLEEQLAIRLFDRIYRG 61
           +  +    L  L  FE AARH SF+ AA EL  T  AIS +I +LEE++ I+LF+R +R 
Sbjct: 11  HSRINSFQLSKLHTFEVAARHNSFSLAADELSLTPSAISHRINKLEEEIGIKLFERTHRK 70

Query: 62  IELTDAGALLFEHVQGGLQGINQGLSLITQQDQHEVLQVATDFAFAAYWLMPRLHRFHKA 121
           + LT+ G  ++  +Q  L  +NQ ++ I   +   +L + +  +FA  WL+PR+H F + 
Sbjct: 71  VVLTEEGQRIYHSLQKTLNNLNQEITDIKNGETSGLLTIYSRPSFAQCWLVPRIHAFKEL 130

Query: 122 NPQVDVSLVTSERNHATLRSDIDVAVLFGDGRFKQGDSLWLFNEEVFPVCSPQWLKDQTT 181
            P +D+ L+T   N +   S IDVA+ F D    +     +F+E + PVC+P++ +  + 
Sbjct: 131 YPSIDLKLLTGNENISFQGSGIDVAIYFDDHMPDKLSCKEIFSETIIPVCTPEYAQKYSL 190

Query: 182 PLTVQNLHDFPLLHLRQENN-----SQWFDWSGVFRELGIASAPTPGQLRFDNYTLLIQA 236
             ++ NL++  LLH  Q  N      +W  W+   +   + +     ++ FD   L + A
Sbjct: 191 TSSMDNLYNTTLLHDNQAWNYNSDADEWKTWANANQ---LENLENISRIGFDRSDLAVIA 247

Query: 237 AIAGQGVAIGWRHLVDNLLEQGWLCRPLSDT-VISRFGYYVVQPQRKRRGQLVERFVEWL 295
           AI   G+A+G   LV + L  G L  P  +T VI +  YYV     K   Q V+ F++WL
Sbjct: 248 AINNAGIAMGRFSLVKSRLSSGELMTPYPNTEVICKQRYYVATLPNK-HNQKVKLFIDWL 306

Query: 296 VAE 298
            ++
Sbjct: 307 ESQ 309