Pairwise Alignments

Query, 263 a.a., transcriptional regulator from Pseudomonas simiae WCS417

Subject, 277 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  113 bits (282), Expect = 5e-30
 Identities = 82/258 (31%), Positives = 124/258 (48%), Gaps = 11/258 (4%)

Query: 10  GNYEISSTACTGLTFARHSHDECVIGVNLLGEEKVWLDRREFDAGPGSITLYNPGQIQGG 69
           G  E+         F+RHSH+   +GV   G +  +       A   SI L N  ++  G
Sbjct: 22  GGLELLDAQYETQNFSRHSHEGYTVGVIERGAQSFYRTGGNHIAPQDSIILVNADEVHTG 81

Query: 70  GAAEGAPWHFVSLYATADQLA-------ADLGLAHLEFDRSLCFQPDLAQRLAAAIKGA- 121
            +A    W + ++Y   +Q A       A+ G  +  F +++ + P+LA +L    +   
Sbjct: 82  HSAVEGGWAYKAMYPLPEQFATVAKEIGANTGAPY--FPQAVVYDPELASQLRLVFETLE 139

Query: 122 LSTDTLVRELNEEALVLLLGQVVNTSGVRLPGSANTGKPLINRAQELLAAQLHQPLTLDH 181
            ST+ L+RE    A ++ L      +  +     +  +PL+   +E L       ++L+ 
Sbjct: 140 KSTNRLLRETLIYASLVKLMTRHGRTAPQADQPLSALRPLL-LVKEFLDDFPQADVSLEE 198

Query: 182 LGVELGLSKFHLLRAFQKETGLTPREWAMQLRTRRAKGLLRNGVPASAAAHTLGFADQSH 241
           L    GLS FHL+R FQK+ GL P  + +Q R R AK LL+ GV  S  A   GF DQSH
Sbjct: 199 LAQLAGLSPFHLVRTFQKQFGLPPHAYQIQARLRLAKTLLKQGVSISETAQECGFHDQSH 258

Query: 242 LNRHFRAAYGITPGVYQR 259
           L+RHF+ A GITP  Y R
Sbjct: 259 LHRHFKKALGITPKQYAR 276