Pairwise Alignments

Query, 263 a.a., transcriptional regulator from Pseudomonas simiae WCS417

Subject, 270 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score = 83.6 bits (205), Expect = 4e-21
 Identities = 64/242 (26%), Positives = 109/242 (45%), Gaps = 8/242 (3%)

Query: 24  FARHSHDECVIGVNLLGEEKVWLDRREFDAGPGSITLYNPGQIQGGGAAEGAPWHFVSLY 83
           F RH H +  IG+   G ++ +        G G + L +P ++  G A     +      
Sbjct: 29  FERHYHLDIHIGLITQGVQRFYHQGAWHQVGQGGVVLMSPDELHDGHAHSNTGYQVQVFS 88

Query: 84  ATADQLAADLGLAHLE----FDRSLCFQPDLAQRLAAAIKGALSTDTLVRELNEEALVL- 138
              + L   L    +E    F++ +   P L   L   +   L  D L  +L ++ L   
Sbjct: 89  IEPEWLQQTLEANQIEQVIGFEQLIVQDPTLFHSLQQ-LHHLLRQDNL-SQLAKDCLPYQ 146

Query: 139 -LLGQVVNTSGVRLPGSANTGKPLINRAQELLAAQLHQPLTLDHLGVELGLSKFHLLRAF 197
                +   S ++ P     G+  +   +E + +QL QP+ L+ L     LS     R F
Sbjct: 147 GFAPLLERYSYLKQPTVKPLGQHNLALLKEWVLSQLDQPIRLEQLAQLCQLSPTQFQRHF 206

Query: 198 QKETGLTPREWAMQLRTRRAKGLLRNGVPASAAAHTLGFADQSHLNRHFRAAYGITPGVY 257
           + +TGLTP  W  +LR  +A  LL++G P +  A+ +GF DQ+H ++ F+A YG++P + 
Sbjct: 207 KAQTGLTPYAWLRRLRLEQAMKLLQSGKPGTDVAYQVGFYDQAHFSKAFKATYGLSPSLI 266

Query: 258 QR 259
            R
Sbjct: 267 TR 268