Pairwise Alignments

Query, 540 a.a., ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

Subject, 638 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  178 bits (452), Expect = 5e-49
 Identities = 154/526 (29%), Positives = 235/526 (44%), Gaps = 51/526 (9%)

Query: 23  GETLLDDLCLSIDH-TPTGIVGRNGRGKSVLAKLIAGLLSPSSGTLSGPPG--TIYVAQN 79
           G+ LL+    +I      G+VG+NG GKS L  L+   L+  +G+ S P      +VAQ 
Sbjct: 13  GKPLLEQASATIHPGDKVGLVGKNGCGKSTLFALLKDELTIDAGSFSKPAHWELAWVAQE 72

Query: 80  VVVAPGETVADLTGTAAILAALDRMARGAAQPDDLELIDDRWGLAE---------RLRNA 130
                   +  +         L+R    A   D+   + D  G  E         R    
Sbjct: 73  TPALDRTALEYVIDGDREYRELERQLMDAEAADNGTKVADLHGKIEMVGGYSIRARASEL 132

Query: 131 LDAAGLSQLAFDTPADQLSGGQLARVAIIGALLAAPPLLVLDEPTNHLDNDGRAWLLRAL 190
           LD  G +Q        Q SGG   R+ +  AL+    LL+LDEPTNHLD D   WL R L
Sbjct: 133 LDGLGFTQEQMSWSLTQFSGGWRMRLNLAQALICRSDLLLLDEPTNHLDLDAVMWLERWL 192

Query: 191 GDWRGGLVVVSHDRSLLNAMA-RIVELSPLGVSVYGGNYDAYRRQRDAEQQAAIAALDHA 249
             + G L+++SHDR  L+ +  RIV +    ++ Y GNY ++  QR  +           
Sbjct: 193 QSYPGTLILISHDRDFLDPIVNRIVHIENQTLNEYTGNYSSFETQRAQKM---------- 242

Query: 250 RLERSRERRRLQKDHDNLQRNAARSRKHAETANVDRFTKARWKGAATQIVSSVRSAHWQH 309
            L++    ++ QK   ++Q    R R  A  A      +A+ +  A + +  V  A + +
Sbjct: 243 -LQQQAIYQKQQKQMAHMQSYIDRFRYKASKAR-----QAQSRIKALERMEKVLPAQFDN 296

Query: 310 KHELDAQVRQAYERVEEETPTLLALPASAVPNGRQVLSLIDVQLPWLPSSGLTVHLAGPV 369
               + +     E      P L+    +A      +L  I + L  +P S          
Sbjct: 297 PFSFEFR-----EPAALPNPILMMDQVAAGYGDHLILEKIRLNL--VPGS---------- 339

Query: 370 RVAVRGPNGCGKSTLLKVLAGEWQAVAGEC--SVPLPCAYIDQH-LALLDDRRSIVEHLN 426
           R+ + G NG GKSTL+K+L+GE +  +G+C  S  +   Y  QH L  L    + ++H+ 
Sbjct: 340 RIGLLGRNGAGKSTLIKLLSGELKPQSGDCTYSQGVKIGYFAQHQLETLHPEETPLQHMM 399

Query: 427 LLDTPLAEAELRTRLALLHLDASRVTQPTGQLSGGERLKAAMAIALWGDKPAQLLLLDEP 486
            +     E ELR  L        +  +     SGGE+ +  +A+ +W  KP  LLLLDEP
Sbjct: 400 QIAPDKNELELRNYLGSFGFHGEKALEKVAPFSGGEKARLVLALIVW-QKP-NLLLLDEP 457

Query: 487 TNHLDLESVMAFEQALQGFNGAMLVVSHDAAFIQSIKPTHFLDWHH 532
           TNHLDL+   A   ALQ + GAM++VSHD   +++     +L   H
Sbjct: 458 TNHLDLDMRQALTLALQSYEGAMVIVSHDRYLLRATTDDLYLVHDH 503



 Score = 87.0 bits (214), Expect = 2e-21
 Identities = 96/325 (29%), Positives = 139/325 (42%), Gaps = 51/325 (15%)

Query: 40  GIVGRNGRGKSVLAKLIAGLLSPSSGTLSGPPGTI--YVAQNVV--VAPGETVADLTGTA 95
           G++GRNG GKS L KL++G L P SG  +   G    Y AQ+ +  + P ET        
Sbjct: 342 GLLGRNGAGKSTLIKLLSGELKPQSGDCTYSQGVKIGYFAQHQLETLHPEET-------- 393

Query: 96  AILAALDRMARGAAQPDDLELIDDRWGLAERLRNALDAAGLSQLAFDTPADQLSGGQLAR 155
                L  M + A   ++LEL           RN L + G             SGG+ AR
Sbjct: 394 ----PLQHMMQIAPDKNELEL-----------RNYLGSFGFHGEKALEKVAPFSGGEKAR 438

Query: 156 VAIIGALLAAPPLLVLDEPTNHLDNDGRAWLLRALGDWRGGLVVVSHDRSLLNAMARIVE 215
           + +   +   P LL+LDEPTNHLD D R  L  AL  + G +V+VSHDR LL A    + 
Sbjct: 439 LVLALIVWQKPNLLLLDEPTNHLDLDMRQALTLALQSYEGAMVIVSHDRYLLRATTDDLY 498

Query: 216 L-SPLGVSVYGGNYDAYRRQRDAEQQAAIAALDHARLERSRERRRLQKDHDNLQRNAARS 274
           L     V  + G+ + Y +    +Q+A              ER+  Q  +     N+A +
Sbjct: 499 LVHDHQVGPFDGDLNDYYKWLTDQQKA--------------ERKETQPTNTANSANSAAA 544

Query: 275 RKHAETANVD-RFTKARWKGAATQIVSSV-RSAHWQHKHELDAQVRQAYERVEEETPT-L 331
           +K  +    D R   A  +   TQ+   + +  H   + E        YE   + T T +
Sbjct: 545 KKEQKRREADFRKLTAPIRKKLTQLEEKLDKLNHVVSEMEAQLSDTSLYEAQNKATLTEV 604

Query: 332 LALPASAVPNGRQVLSLIDVQLPWL 356
           LA  A+A         L  V+L W+
Sbjct: 605 LAKQAAAKS------ELEQVELEWM 623