Pairwise Alignments

Query, 540 a.a., ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

Subject, 555 a.a., energy-dependent translational throttle protein EttA from Vibrio cholerae E7946 ATCC 55056

 Score =  174 bits (441), Expect = 8e-48
 Identities = 159/536 (29%), Positives = 254/536 (47%), Gaps = 65/536 (12%)

Query: 26  LLDDLCLSI-DHTPTGIVGRNGRGKSVLAKLIAGLLSPSSGTLSGPPGTI--YVAQNVVV 82
           +L D+ LS       G++G NG GKS L +++AG+     G     PG    Y+ Q   +
Sbjct: 21  ILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGIDKDIDGEARPQPGLKVGYLPQEPKL 80

Query: 83  APGETVADLTGTAAI-----LAALDRMARGAAQPD-DLELIDDRWGLAE---------RL 127
              +TV ++   A       L  LD +    A+PD D + +    G  E          L
Sbjct: 81  DESKTVREVVEEAVADVAYALKRLDEVYAAYAEPDADFDALAKEQGELEALIQAKNGHNL 140

Query: 128 RNALDAAG--LSQLAFDTPADQLSGGQLARVAIIGALLAAPPLLVLDEPTNHLDNDGRAW 185
            NAL+ A   L    +D     LSGG+  RVAI   LL  P +L+LDEPTNHLD +  AW
Sbjct: 141 DNALERAADALRLPEWDAQVKYLSGGERRRVAICRLLLENPDMLLLDEPTNHLDAESVAW 200

Query: 186 LLRALGDWRGGLVVVSHDRSLL-NAMARIVELSPLGVSVYGGNYDAYRRQRDAEQQAAIA 244
           L R L D+ G +V ++HDR  L NA   I+EL       + GNY ++  Q+DA  +    
Sbjct: 201 LERFLVDYAGTVVAITHDRYFLDNAAGWILELDRGEGIPWQGNYTSWLEQKDARLK---- 256

Query: 245 ALDHARLERSRERRRLQKDHDNLQRNAARSRKHAETANVDRFTKARWKGAATQIVSSVRS 304
               A  E++R+ + ++K+ + +++N  + R+    A + RF               +++
Sbjct: 257 --QEASQEKARQ-KTIEKELEWVRQN-PKGRQAKSKARMARF-------------EELQN 299

Query: 305 AHWQHKHELDAQVRQAYERVEEETPTLLALPASAVPNGRQVLSLIDVQLPWLPSSGLTVH 364
              Q ++E +       ER+ ++   +  L  S   +GR ++  +   +P          
Sbjct: 300 TEHQKRNETNELFIPPGERLGDKVIEVKNLTKSF--DGRVLIDDLSFSMP---------- 347

Query: 365 LAGPVRVAVRGPNGCGKSTLLKVLAGEWQAVAG--ECSVPLPCAYIDQHLALLDDRRSIV 422
             G + V + GPNG GKSTL K+L+G  +  +G  E    +  A +DQ    ++D+ ++ 
Sbjct: 348 -KGAI-VGIIGPNGAGKSTLFKMLSGVEKPDSGTIELGDTVKLASVDQFRDSMNDKHTVF 405

Query: 423 EHL----NLLDTPLAEAELRTRLALLHLDASRVTQPTGQLSGGERLKAAMAIALWGDKPA 478
           + +    +++     E   R   +  +       +  G+LSGGER +  +A  L      
Sbjct: 406 QEISEGADIIRINNFEIPARAYCSRFNFKGVDQQKVIGELSGGERNRVHLAKLL--KAGG 463

Query: 479 QLLLLDEPTNHLDLESVMAFEQALQGFNGAMLVVSHDAAFIQSIKPTHFLDWHHTG 534
            +LLLDEPTN LD+E++ A E+AL  F G  +V+SHD  F+  I  TH LD+   G
Sbjct: 464 NVLLLDEPTNDLDVETLRALEEALLEFPGCAMVISHDRWFLDRI-ATHILDYRDEG 518