Pairwise Alignments

Query, 307 a.a., multidrug transporter from Pseudomonas simiae WCS417

Subject, 316 a.a., multidrug transporter from Pseudomonas fluorescens FW300-N2E3

 Score =  418 bits (1075), Expect = e-122
 Identities = 223/304 (73%), Positives = 248/304 (81%), Gaps = 1/304 (0%)

Query: 5   SDRITYMKLAAVTMIWGGTFVAGRYLSGTVDPLLAASLRFALASLALLGFLGLARIPLAR 64
           SD   Y+KLA VTMIWGGTFVAGR+L+ ++ PL AASLRF LASLALL F+ LARIPLAR
Sbjct: 12  SDVPVYLKLATVTMIWGGTFVAGRFLADSLSPLFAASLRFLLASLALLLFMVLARIPLAR 71

Query: 65  PSPRQLLQLGMLGFFGIFFYNLCFFYGLQSINASRASLIVALNPAVIGLASRWLFKERLG 124
           P+ RQ LQLG+LGFFGIFFYN+CFFYGL  INASRASLIVALNPAVIGLAS  LFKERL 
Sbjct: 72  PTFRQWLQLGVLGFFGIFFYNVCFFYGLHYINASRASLIVALNPAVIGLASWLLFKERLS 131

Query: 125 ASNVAGILLCLTGAAVVIVSRNPHVLNE-ATSSWRGDLLIFGCVVGWGIYSLFSRGLNQS 183
            + +AGI +C+ GA VVI SRN  V +  A +SW GDLLIFGCV+GWGIYSLFS+GLNQ+
Sbjct: 132 RTKIAGIAICIAGAGVVIFSRNQPVFDGGAANSWIGDLLIFGCVLGWGIYSLFSKGLNQA 191

Query: 184 LGPLQTVTWSILLGTLMLTLTTLIMGRFTLEAMGRLQTAQGLSLAYLGVLGSALAYIGYY 243
           LGPL TVT+SI+LGTLML  T+ + G  +LE +  LQ  Q LSL YLGVLGSALAYI YY
Sbjct: 192 LGPLHTVTYSIVLGTLMLCTTSAVRGEVSLEVLDDLQVTQLLSLLYLGVLGSALAYIWYY 251

Query: 244 DGIRRIGATRSGVFIALNPLTAVICGALLLDEPLSLPMLIGGAVILLGIYLCNKPLARAR 303
           DGIRRIGATRSGVFIALNPLTAVI GALLL E LS  M +GGA ILLGIYLCNKPLA A 
Sbjct: 252 DGIRRIGATRSGVFIALNPLTAVILGALLLGEQLSGAMYLGGAAILLGIYLCNKPLAPAS 311

Query: 304 AMGI 307
             GI
Sbjct: 312 KRGI 315