Pairwise Alignments

Query, 307 a.a., multidrug transporter from Pseudomonas simiae WCS417

Subject, 301 a.a., DMT family transporter from Rhodopseudomonas palustris CGA009

 Score = 92.8 bits (229), Expect = 9e-24
 Identities = 82/290 (28%), Positives = 129/290 (44%), Gaps = 14/290 (4%)

Query: 10  YMKLAAVTMIWGGTFVAGRYLSGTVDPLLAASLRFALASLALLGFLGLARIPLARPSPRQ 69
           Y+ L+  ++ W G  V GR ++G V P+  +  R+  A L LL F         R    Q
Sbjct: 17  YLLLSLTSLFWAGNIVLGRAVAGHVPPVTLSCARWVGAMLLLLPFAWPHLRHDWRKLRAQ 76

Query: 70  LLQLGMLGFFGIFFYNLCFFYGLQSINASRASLIVALNPAVIGLASRWLFKERLGASNVA 129
              + +L   G    N   ++GLQ   A  A L+ +  P  + L S  LF  RL      
Sbjct: 77  WKLMIVLSATGFAINNALSYWGLQYTQALNALLMQSSGPLFVALWSLLLFGVRLTWMQAT 136

Query: 130 GILLCLTGAAVVIVSRNPHVLNEATSSWRGDLLIFGCVVGWGIYSLFSRGLNQSLGPLQT 189
           GI L L G   +I+ R            RGDL++ G +  +G+YS        +L P + 
Sbjct: 137 GIALSLLGVLTIIL-RGDFAALAGIELNRGDLMVAGALCAFGLYS--------ALMPKRP 187

Query: 190 VTWSILLGTLMLTLTTLIMGRFTL--EAMGRLQTAQGLS---LAYLGVLGSALAYIGYYD 244
            T  + L  +      L++  F+    A G   +A  +S   LAY+ +  S LAY+ +  
Sbjct: 188 ATHPLSLIVVTTGCGALLLLPFSAWEYASGVRPSADWISVATLAYVVIFPSMLAYLCFNR 247

Query: 245 GIRRIGATRSGVFIALNPLTAVICGALLLDEPLSLPMLIGGAVILLGIYL 294
           G+  IG  RS  F+ L P+   +   +LL E   L  L G A+++ G+++
Sbjct: 248 GVALIGPNRSAPFLHLMPVFGSVMAIVLLGEKPELFHLAGYAMVVAGVFI 297