Pairwise Alignments

Query, 307 a.a., multidrug transporter from Pseudomonas simiae WCS417

Subject, 308 a.a., DMT(drug/metabolite transporter) superfamily permease from Dechlorosoma suillum PS

 Score =  104 bits (259), Expect = 3e-27
 Identities = 90/304 (29%), Positives = 142/304 (46%), Gaps = 13/304 (4%)

Query: 7   RITYMKLAAVTMIWGGTFVAGRYLSGTVDPLLAASLRFALASLALLGFLGLARI----PL 62
           R  Y+ L    + W G  V GR +   V P+  A  R+ +A LAL+  L L  +    PL
Sbjct: 9   RHPYLLLTLTALFWSGNMVLGRGIRADVPPIALAFWRWVIA-LALIAPLALPHLKEQWPL 67

Query: 63  ARPSPRQLLQLGMLGFFGIFFYNLCFFYGLQSINASRASLIVALNPAVIGLASRWLFK-E 121
            +   + +L LG+LG   +  YN   +  LQ   A+ A L+ +  P ++ +A  WLF  +
Sbjct: 68  LKKGWKPVLLLGILG---VGCYNTFAYVALQYTAATNAVLLNSFIP-IVTIALSWLFLGK 123

Query: 122 RLGASNVAGILLCLTGAAVVIVSRNPHVLNEATSSWRGDLLIFGCVVGWGIYSLFSRGLN 181
           RL      G+ +   GA  +I   +  VL   + +  GD+ + G V+ W IY++  +   
Sbjct: 124 RLKPIEAVGVAISFLGATTIIARGDLAVLLGLSLNL-GDVWMLGAVLTWAIYTVGLQWRP 182

Query: 182 QSLGPLQTVTWSILLGTLMLT-LTTLIMGRFTLEAMG-RLQTAQGLSLAYLGVLGSALAY 239
             + P+  +    L+G L L  +    +G F   A    L       +AY+GVL S + Y
Sbjct: 183 AGVHPMLMLGALTLVGVLALAPIYAHELGAFGGPARHINLHWGSLAGIAYVGVLPSFVGY 242

Query: 240 IGYYDGIRRIGATRSGVFIALNPLTAVICGALLLDEPLSLPMLIGGAVILLGIYLCNKPL 299
           I Y  G+  +GA ++ +FI L P+   +  AL L E   L   +G  +I  GIYL    L
Sbjct: 243 IFYNRGVAEVGANKASLFIHLMPVFGTLLSALFLGELPHLYHFVGIGLIFSGIYLTMARL 302

Query: 300 ARAR 303
            R +
Sbjct: 303 PRLK 306