Pairwise Alignments

Query, 307 a.a., multidrug transporter from Pseudomonas simiae WCS417

Subject, 303 a.a., putative permease, DMT superfamily from Dechlorosoma suillum PS

 Score = 84.3 bits (207), Expect = 3e-21
 Identities = 80/302 (26%), Positives = 130/302 (43%), Gaps = 15/302 (4%)

Query: 2   HSSSDRI--TYMKLAAVTMIWGGTFVAGRYLSGTVDPLLAASLR--FALASLALLGFLGL 57
           H +SDRI      LAA    +   FV   Y +  VD +   SLR  F+L +   +GF   
Sbjct: 5   HWNSDRIGVALAVLAAFGFSFKAIFVKLAYAAAPVDAVTLLSLRMVFSLPAFLWIGFTAG 64

Query: 58  ARIPLARPSPRQLLQLGMLGFFGIFFYNLCFFYGLQSINASRASLIVALNPAVIGLASRW 117
             IPL R     L+ LG+LG++     ++  F GLQ I+A    LI+   P +  L    
Sbjct: 65  NAIPLTRRDWGTLVVLGVLGYYAS---SMLDFLGLQYISAGLERLILFTYPTLTVLIGVL 121

Query: 118 LFKERLGASNVAGILLCLTGAAVVIVSRNPHVLNEATSSWRGDLLIFGCVVGWGIYSLFS 177
              + L    V  +LL   G  +   + +  +  +  +   G   +FG  + + IYS  +
Sbjct: 122 FMGQSLEKRQVGALLLSYAGIGLAF-AHDLQLGGDVATLLTGAAFVFGSALTYAIYSAGA 180

Query: 178 RGLNQSLGPLQTVTWSILLGTLMLTLTTLIMGRFTLEAMGRLQTAQGLSL--AYLGVLGS 235
               + LG  +    ++L+ T     T   +  F  + +  L     + L  A + +  +
Sbjct: 181 EPAIRRLGSARFAALAMLVST-----TATQLHFFATQPLSALVQPLPIYLYGAAMALFST 235

Query: 236 ALAYIGYYDGIRRIGATRSGVFIALNPLTAVICGALLLDEPLSLPMLIGGAVILLGIYLC 295
            L  +     IRRIGA RS +   L P+  +     LL EP+S   L G  ++L G+ L 
Sbjct: 236 VLPILWQSAAIRRIGAARSVLIGTLGPVLTIFFSWWLLQEPVSAAQLAGAGLVLAGVLLV 295

Query: 296 NK 297
           ++
Sbjct: 296 SR 297



 Score = 36.2 bits (82), Expect = 1e-06
 Identities = 42/144 (29%), Positives = 63/144 (43%), Gaps = 17/144 (11%)

Query: 17  TMIWGGTFVAGRYL-----SGTVDPLLA--ASLRFALASLAL------LGFLGLARIP-L 62
           T++ G  FV G  L     S   +P +    S RFA  ++ +      L F     +  L
Sbjct: 158 TLLTGAAFVFGSALTYAIYSAGAEPAIRRLGSARFAALAMLVSTTATQLHFFATQPLSAL 217

Query: 63  ARPSPRQLLQLGMLGFFGIFFYNLCFFYGLQSINASRASLIVALNPAVIGLASRWLFKER 122
            +P P  L    M   F      L     ++ I A+R+ LI  L P +    S WL +E 
Sbjct: 218 VQPLPIYLYGAAM-ALFSTVLPILWQSAAIRRIGAARSVLIGTLGPVLTIFFSWWLLQEP 276

Query: 123 LGASNVAGILLCLTGAAVVIVSRN 146
           + A+ +AG  L L G  V++VSR+
Sbjct: 277 VSAAQLAGAGLVLAG--VLLVSRS 298