Pairwise Alignments

Query, 307 a.a., multidrug transporter from Pseudomonas simiae WCS417

Subject, 292 a.a., protein of unknown function DUF6 transmembrane (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  199 bits (506), Expect = 6e-56
 Identities = 112/293 (38%), Positives = 164/293 (55%), Gaps = 6/293 (2%)

Query: 8   ITYMKLAAVTMIWGGTFVAGRYLSGTVDPLLAASLRFALASLALLGFLGLARIPLAR--- 64
           + Y KL   T+ WGGTFVAGR  +    P  AA LRFA+A+  L  ++      L R   
Sbjct: 2   LLYAKLMLATVFWGGTFVAGRIAAAHAGPFSAAFLRFAMATGLLFWYVRRREGALPRLTS 61

Query: 65  PSPRQLLQLGMLGFFGIFFYNLCFFYGLQSINASRASLIVALNPAVIGLASRWLFKERLG 124
           P       + +LG  G+F YN  FF GL ++ ASRA++IV  NP  I + +     E L 
Sbjct: 62  PGMHGWAGVLLLGATGVFAYNALFFTGLATVPASRAAVIVTNNPIAIAVGAALFLGEPLS 121

Query: 125 ASNVAGILLCLTGAAVVIVSRNPHVLNEATSSWRGDLLIFGCVVGWGIYSLFSRGLNQSL 184
              +AGILL + GA + I   NP  L  +  SW GD+ + GC+  W  YSL  + + ++L
Sbjct: 122 RRKLAGILLSVGGAVIAITRGNPLTLFSSALSW-GDVALLGCLASWAAYSLLGKVVMRAL 180

Query: 185 GPLQTVTWSILLGTLMLTLTTLIMGRFTLEAMGRLQTAQGLSLAYLGVLGSALAYIGYYD 244
            PL  VTWS  +GT+ML    L  G +T  A+     A  ++ AYLGV G+ L +  +Y+
Sbjct: 181 SPLAAVTWSCAVGTVMLLPFALHEGLWT--ALPEYPAALWIAAAYLGVFGTVLGFTWFYE 238

Query: 245 GIRRIGATRSGVFIALNPLTAVICGALLLDEPLSLPMLIGGAVILLGIYLCNK 297
            ++ IGA R+GVFI   PLTA++C   +L E L + +L+G A++  G+++ N+
Sbjct: 239 AVKEIGAGRAGVFINFVPLTAIVCAWAMLGEALPVSLLLGAALVTCGVFITNR 291