Pairwise Alignments

Query, 307 a.a., multidrug transporter from Pseudomonas simiae WCS417

Subject, 286 a.a., protein of unknown function DUF6 transmembrane (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  103 bits (256), Expect = 6e-27
 Identities = 80/284 (28%), Positives = 128/284 (45%), Gaps = 12/284 (4%)

Query: 18  MIWGGTFVAGRYLSGTVDPLLAASLRFALASLALLGFLGLARIPLARPSPRQLLQLGMLG 77
           +I G +  A R++S T+   L   LRF +A+   +  L      L R   R    L +  
Sbjct: 2   VIVGSSVAAARFVSLTLPSHLVQELRFLVAACIAVPLLYRREGGLPRLPARDWGVLFLQA 61

Query: 78  FFGIFFYNLCFFYGLQSINASRASLIVALNPAVIGLASRWLFKERLGASNVAGILLCLTG 137
             G   +N+    G+  ++A+ A ++ +  PAV+ LAS  L +ER G   +AGI  C+ G
Sbjct: 62  AAGSLLFNVLLLAGVARLDAAAAGVVTSTTPAVMALASLVLLRERPGPRTLAGIACCVAG 121

Query: 138 AAVVIVSRNPHV--------LNEATSSWRGDLLIFGCVVGWGIYSLFSRGLNQSLGPLQT 189
             V+ ++  P          L  + +   G LL+ G V    ++ L  R L   + PL  
Sbjct: 122 VLVLRLAPVPGAAGGDAALSLTASGADGVGLLLVLGAVCCETLFLLLGRTLRTPVSPLAA 181

Query: 190 VTWSILLGTLMLTLTTLIMGRFTLEAMGRLQTAQGLSLAYLGVLGSALAYIGYYDGIRRI 249
            T   L G +      L       E    L     L + Y G + +  AYI ++ G+ R+
Sbjct: 182 STACTLFGAVQFLPLALPQAHRVAE----LDVTGWLLVGYYGAVITVAAYIFWFRGVARV 237

Query: 250 GATRSGVFIALNPLTAVICGALLLDEPLSLPMLIGGAVILLGIY 293
            A  +G F ++ P++A+   ALLL EP+    L G A +L GI+
Sbjct: 238 SAGTAGAFTSVLPVSALAFSALLLGEPVGWAHLAGVACVLCGIW 281