Pairwise Alignments

Query, 307 a.a., multidrug transporter from Pseudomonas simiae WCS417

Subject, 310 a.a., membrane protein from Herbaspirillum seropedicae SmR1

 Score = 83.6 bits (205), Expect = 6e-21
 Identities = 79/288 (27%), Positives = 133/288 (46%), Gaps = 21/288 (7%)

Query: 22  GTFVA-GRYLSGTVDPLLAASLRFALASLALLGFLG--LARIPLARPSPRQLLQLGMLGF 78
           G +VA  + L+  +   L A LRF + ++A+L +L    +  PL+  S R L+ L    F
Sbjct: 22  GAYVALTKPLAAMLPVFLLAWLRFGIGAVAMLRWLKKPASEQPLSTQS-RWLVFLE--SF 78

Query: 79  FGIFFYNLCFFYGLQSINASRASLIVALNPAVIGLASRWLFKERLGASNVAGILLC-LTG 137
            G F + LC   G+   NA  A +I++  PAV+ + S W+F +   +  V G + C   G
Sbjct: 79  LGNFLFTLCMITGVSMTNAVSAGVIMSAIPAVVAVMS-WIFLKEKISLRVWGAVACGAVG 137

Query: 138 AAVVIVSRNPHVLNEATS---SWRGDLLIFGCVVGWGIYSLFSRGLNQSLGPLQTVT--- 191
             ++ ++++ H  + A+    +W G+ L+F  V+    Y++  + L   L P +      
Sbjct: 138 IGLLSLAKDGHGASAASGGQYAWLGNGLVFCAVLCEAAYAVIGKKLTAVLTPKRISAVIN 197

Query: 192 -WSILLGTLMLTLTTLIMGRFTLEAMGRLQTAQGLSLAYLGVLGSALAYIGYYDGIRRIG 250
            W +LL T M   T L          G +       L + G+  S      +  G++ + 
Sbjct: 198 LWGLLLMTPMGVYTALHFD------FGAVPANMWWLLLFYGLAASVWTVWLWMTGLKVVP 251

Query: 251 ATRSGVFIALNPLTAVICGALLLDEPLSLPMLIGGAVILLGIYLCNKP 298
           A R+GVF  + P++A + G L L E LS       A+ L G+ L   P
Sbjct: 252 AARAGVFTVMLPVSAALVGVLALGESLSALQAGAFAIALAGMLLATLP 299