Pairwise Alignments

Query, 300 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 313 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  229 bits (583), Expect = 8e-65
 Identities = 120/296 (40%), Positives = 176/296 (59%), Gaps = 1/296 (0%)

Query: 1   MSSILDLEVFVRTADTGSLSAAARGLGLTPAAASIALKRLETRLGIRLLARSTRSMRLTE 60
           M ++ DL +FV TA  GS S AA  L LT AA S A++RLE ++   L  RSTR +RLT 
Sbjct: 1   MKALNDLNLFVETARQGSFSKAANSLSLTTAAVSAAIRRLEEQVQFPLFVRSTRHIRLTH 60

Query: 61  EGRRYLDSVRVALSALSEGEQALKQQSQGLSGLLQLAAPSDFGRNVVLGWLDEFKAEHPN 120
           EG  +L   + AL+ L EG   +      L+G L ++APSD GRN++L W+DEF A HPN
Sbjct: 61  EGEIFLAKTQTALATLQEGLDQIACARGQLAGQLHISAPSDLGRNLLLDWIDEFIALHPN 120

Query: 121 IRLQLMLNDSNADLFRETVDIALRFGVPQDSSLVALPIAPDHHRVACASPDYLARHGTPR 180
           + ++L L+D   D++   VDIA+R+G P DS+LVA+ +   + RV CASP+YLA H    
Sbjct: 121 VTVKLDLSDRLTDMYANPVDIAIRYGQPADSNLVAMLLCDSNERVLCASPEYLAAHPPIL 180

Query: 181 EPMELSRHSALRYMRQGQVSKTWRFRQADQLQEVEVTGDFLSNDGEIVRRWALGGHGIAY 240
            P +L  H+ L +M    +   W   +  +   V V G+   NDGE+V R A+ G GIA 
Sbjct: 181 HPDDLQHHNCLCFMLADTLHNKWILSRNGETHSVVVQGNPACNDGEVVHRLAVKGKGIAN 240

Query: 241 KARLDVIGDIAAGRLVALLEDWQGEPAPFNLMCPHRLQVSERVKVLHRFLQQR-CQ 295
           K+ +D+  DI  GRLV +L +W+  P P  ++C  R  ++  ++    F++++ CQ
Sbjct: 241 KSLMDISQDIIDGRLVRILPEWESGPVPIYMVCADRRLITPTIRAFQEFIREKGCQ 296