Pairwise Alignments

Query, 300 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 309 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  249 bits (636), Expect = 6e-71
 Identities = 133/292 (45%), Positives = 187/292 (64%), Gaps = 1/292 (0%)

Query: 6   DLEVFVRTADTGSLSAAARGLGLTPAAASIALKRLETRLGIRLLARSTRSMRLTEEGRRY 65
           DL +FVR AD GS+SAAA  L L+ A+AS A+KRLE +L   L  R+TRS+RLT +G RY
Sbjct: 5   DLALFVRVADCGSISAAAAELELSAASASAAIKRLEKQLDTSLFVRTTRSLRLTAQGERY 64

Query: 66  LDSVRVALSALSEGEQALKQQSQGLSGLLQLAAPSDFGRNVVLGWLDEFKAEHPNIRLQL 125
           L   R ALS L+ GEQA+      +SG L L+  SDFGRN+ + WLD+F  + P ++++L
Sbjct: 65  LIHCRRALSDLALGEQAIASDKGKVSGTLSLSVSSDFGRNLFVPWLDDFLLDFPQLQVRL 124

Query: 126 MLNDSNADLFRETVDIALRFGVPQDSSLVALPIAPDHHRVACASPDYLARHGTPREPMEL 185
            L D+ +  + + +D+A+R+G PQDS+ VA PI     RV CASP YLA+ G P    +L
Sbjct: 125 HLGDNISSFYHDKIDVAVRYGKPQDSNQVAFPIC-SADRVLCASPKYLAKFGQPETLEQL 183

Query: 186 SRHSALRYMRQGQVSKTWRFRQADQLQEVEVTGDFLSNDGEIVRRWALGGHGIAYKARLD 245
           ++H+ L Y    +    W+F +  Q  +V VTG+  +ND EI RRWA+ G G+ +K+ LD
Sbjct: 184 TQHNCLFYKLDERTHDQWQFERDGQECKVRVTGNRSANDAEIARRWAVAGKGLVFKSSLD 243

Query: 246 VIGDIAAGRLVALLEDWQGEPAPFNLMCPHRLQVSERVKVLHRFLQQRCQTL 297
           +  DI AGRLV LL +++GE     L+CP R  V+  V +L   L+QRC+ L
Sbjct: 244 LAEDIMAGRLVPLLPEYRGESVNLYLVCPGREHVTPVVLLLREMLRQRCKAL 295