Pairwise Alignments

Query, 370 a.a., acetoin utilization protein from Pseudomonas simiae WCS417

Subject, 439 a.a., histone deacetylase family protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  139 bits (350), Expect = 1e-37
 Identities = 85/242 (35%), Positives = 130/242 (53%), Gaps = 14/242 (5%)

Query: 114 LSAGLTMAAVDAVLKGLADNAYSLSRPPGHHCL--ADSAMGFCFLANIAIAIEAAKVRNG 171
           +SAG  + A   V++  AD A++L RPPGHH +       GFC +   A+ +E  + + G
Sbjct: 82  VSAGGAIKAARLVMEKRADKAFALIRPPGHHAMRVVHGNRGFCNINIEAVMLEHIREQYG 141

Query: 172 LGKVAVIDWDVHHGNGTQSIFEARADVLTISLHQDG-CYPPGYSGEQERGRGAGLGANIN 230
             +VA++D D HHG+GTQ I+    D L ISLHQDG    PG    QE G    +G  IN
Sbjct: 142 RLRVAIVDTDCHHGDGTQDIYWHDRDTLFISLHQDGRTLYPGTGFPQELGGPNAMGRTIN 201

Query: 231 IPLPPGSGHDAYLHAMNRIVVPALERFQPELIIVACGYDANAVDPLARMLLHSESFRLMT 290
           IPLPPG+    +LH +  +V P L+ F+P+LII + G D +  DP+  M   +  + ++ 
Sbjct: 202 IPLPPGTSDRGFLHVIEHVVRPILDDFKPDLIINSAGQDNHFSDPITNMNFTARGYAMLN 261

Query: 291 RCVRQAAERLCQGRLVLVHEGGYS-EAYVPFCGLATLEELSGVR-TAVDDPMLALVELQQ 348
           R +            + V EGGY+ +  +P+  L     ++G+    V +P L L  ++Q
Sbjct: 262 RMLDPD---------IAVLEGGYAIQGALPYVNLGICLAMAGLDFDDVREPGLDLAAIEQ 312

Query: 349 PK 350
           P+
Sbjct: 313 PR 314