Pairwise Alignments

Query, 397 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 984 a.a., TMAO reductase system sensor histidine kinase/response regulator TorS from Vibrio cholerae E7946 ATCC 55056

 Score =  126 bits (317), Expect = 2e-33
 Identities = 85/257 (33%), Positives = 135/257 (52%), Gaps = 14/257 (5%)

Query: 142 ERSRREQELLLTRLQATQAELEQAVRMRDDFMSIVAHEVRTPLNGLILETQLRKMHLARD 201
           E + +  + +L   +A Q + EQA R +  F++ ++HE+RTP+NG+     L    L +D
Sbjct: 444 EMNHKLNQEVLNHAKARQ-QAEQASRAKSAFLATMSHEIRTPMNGV-----LGTARLLQD 497

Query: 202 NAAAFTLDKMHAMVDRDERQIQSLIRLIEDMLDVSRIRTGKLSIRPARFDLAQLVSNLVE 261
                T      +++R  R   SL+ ++ D+LD S+I  G L I    FDL +LVS   E
Sbjct: 498 TTLTSTQQHYVQVINRSGR---SLLAILNDVLDYSKIEAGHLEIHHTHFDLYRLVSETHE 554

Query: 262 NFAPQVAAADSSMALVADGPVEGHW--DEFRIEQVVTNLLTNALRYGAKSPVEVRV-YSE 318
               +      ++    D  V  +W  DE RI QV+ NL+ N +++  +  V +R+  + 
Sbjct: 555 LMQSRAREKGITLTYHIDEDVTQYWQGDEIRIGQVLNNLVGNGIKFTDQGEVRIRIRLAP 614

Query: 319 HGEA-RVEVRDHGIGISAENQKRIFQQFERVSASQ-VAAGLGLGLFISEQIVAAHGGTIE 376
            G+  R  V D GIGI+ E Q  +F  F +  A +    G GLGL IS ++V A GG ++
Sbjct: 615 DGQGIRFAVEDSGIGIAEEEQATLFDAFTQADAGRRKLGGTGLGLAISRKLVQAMGGELQ 674

Query: 377 VESQIGEGALFRVCLPL 393
           + SQ+G+G+ F   LPL
Sbjct: 675 LASQLGQGSCFWFTLPL 691



 Score = 48.9 bits (115), Expect = 6e-10
 Identities = 33/108 (30%), Positives = 51/108 (47%), Gaps = 2/108 (1%)

Query: 7   AKLLIVDDLPENLLALEALIKREDRQVFKALSADEALSLLLEHEFAMAILDVQMPGMNGF 66
           A +L+V+D   N L  +  +     QV  A S  EA     +  F +A+LD+ +P  NG 
Sbjct: 710 ANVLLVEDNEVNCLVAQGFLTSLGHQVTLAKSVQEAKLCFQQQRFDIALLDIHLPDGNGV 769

Query: 67  ELAELMRGTEKT-KNIPIVFVSAAGRELNYAFKGYESGAVD-FLHKPL 112
           +L   +R  E +  N  I F++ +    N    GY +   D +L KPL
Sbjct: 770 DLLRDLRQMEDSIHNAVIPFIAVSAHVFNEEVAGYLAAGFDGYLPKPL 817