Pairwise Alignments

Query, 304 a.a., integrase from Pseudomonas simiae WCS417

Subject, 311 a.a., tyrosine recombinase XerC from Vibrio cholerae E7946 ATCC 55056

 Score = 84.7 bits (208), Expect = 2e-21
 Identities = 60/198 (30%), Positives = 98/198 (49%), Gaps = 10/198 (5%)

Query: 105 AAPGTRLSQGRNLRRSLIREMMEVCAADPRPQGLRDAAVIGILYGSGMRKSESVNLDLAQ 164
           +AP  + +  +NL    + +++EV   D  P  +RD A++ ++YG+G+R +E V++D+  
Sbjct: 111 SAPRKQRTLPKNLDVDEMAQLLEV--TDDDPLSIRDRAIMELMYGAGLRLAELVSIDIKD 168

Query: 165 INFEERSLRVIGKGNKELIKYAPDWAFAKLQAWLAFRREQLKEGEHDDSFLFNRIRRGSH 224
           +N  E  +RVIGKGNKE   +    A   +  WL   R QL +      F+    + G+ 
Sbjct: 169 VNLSEGEIRVIGKGNKERKVWFAGQAQEWVGKWLKL-RSQLADSAETALFV---SKLGTR 224

Query: 225 ITRERITKHAIYYIARQRGQQVGVKIMPHDFRRSFITRVIE-EHDLSIAQKLAHHTNIQT 283
           I+   + K    +    + Q V   I PH  R SF T ++E  ++L   Q+L  H NI T
Sbjct: 225 ISHRSVQKRMAEW---GQKQAVASHISPHKLRHSFATHMLESSNNLRAVQELLGHENIAT 281

Query: 284 TASYDVRDDNERRRAVDR 301
           T  Y   D     +  D+
Sbjct: 282 TQIYTHLDFQHLAQVYDQ 299