Pairwise Alignments

Query, 304 a.a., integrase from Pseudomonas simiae WCS417

Subject, 298 a.a., tyrosine recombinase XerD subunit from Pseudomonas syringae pv. syringae B728a

 Score = 87.0 bits (214), Expect = 5e-22
 Identities = 64/228 (28%), Positives = 113/228 (49%), Gaps = 17/228 (7%)

Query: 64  EDGYAPNTSSLYVNAVRGVMNEAWRLNLISQEHLLRMRTVKAAPGTRLSQGRNLRRSLIR 123
           ++ Y P +++ +++  RG      R  LI+ +  L++   +         G+ L +SL  
Sbjct: 65  DNAYKPRSTARFLSGARGFYRYLLREKLIAVDPTLQIDMPQL--------GKPLPKSLSE 116

Query: 124 EMMEVCAADP---RPQGLRDAAVIGILYGSGMRKSESVNLDLAQINFEERSLRVIGKGNK 180
             +E   A P    P G RD A++ +LY  G+R +E ++L L Q+N  +  LRV+GKG+K
Sbjct: 117 ADVEALLAAPDLSEPIGERDRAMLEVLYACGLRVTELISLTLEQVNLRQGVLRVMGKGSK 176

Query: 181 ELIKYAPDWAFAKLQAWLAFRREQLKEGEHDDSFLFNRIRRGSHITRERITKHAIYYIAR 240
           E +    + +   ++ +L   R++L  G+  D    +   RG  +TR+    H I + A 
Sbjct: 177 ERLVPMGEESIVWVERYLRGARDELLGGKPSDVLFPS--TRGDQMTRQTFW-HRIKHQAT 233

Query: 241 QRGQQVGVKIMPHDFRRSFITRVIEE-HDLSIAQKLAHHTNIQTTASY 287
             G  +G  + PH  R +F T ++    DL + Q L  H+++ TT  Y
Sbjct: 234 VAG--IGKSLSPHTLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIY 279