Pairwise Alignments

Query, 537 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  188 bits (478), Expect = 4e-52
 Identities = 145/553 (26%), Positives = 278/553 (50%), Gaps = 46/553 (8%)

Query: 9   LLIATGLLTALIMSLAGYLGNTRMGTAVQDSELSMTALRNHMEADMMHDALRADVLSAML 68
           + +A G++  + ++  GYL N+     ++   L++T   + + + M+ + ++ ++ S   
Sbjct: 13  IAVAFGVIALINLAFGGYLYNSLH--TIKSDVLNLTD--DTLPSMMLVNGIKYNMSSVRR 68

Query: 69  VGLGKSTST-KAQVSDSLKEHAEHFRQVLAD--------------NLKLPLDNTLKANLE 113
             +   +ST +A++++ ++   +H++Q+  D              ++ +P+ N     L 
Sbjct: 69  AQISLLSSTDEAEIAEDIRWMNDHYQQIAQDLSRYERSIWTDHERSIFMPVKNLWNEYLR 128

Query: 114 KIKPSLDNYISTGERIVTLALDDPDAARGELGTFNAAFSQLEDQMATLSELIENNTQQAS 173
           ++  S +N I   E I        D  R  L TF    + +++ +      ++NN  +  
Sbjct: 129 QLG-SFNNDILQKEMIKA----QQDLQRS-LPTFEKLETAIDELLKLNLSYVDNNRSEL- 181

Query: 174 VGTRQSISVANFTLGVVLIASLILLLAQGRWVILSIM-GPLQTASRIADSIAHGNLSEPI 232
             T    +++ F+  V  I +L+  ++   W++ +++  PL      A++IA GNL+  +
Sbjct: 182 --TELIDNISEFS--VASIVALLAFMSAVTWLLTNLICSPLMQVVTQANAIAEGNLAHRL 237

Query: 233 V-EPVRKDEASALIRSLATMQRDLRGMIDVVRSNAHGVNTTSEQLSHGCHEVAGSSQQ-- 289
             + +  DE   L  + + MQ +LR M++ +        T++ QL+H   EV+  S+Q  
Sbjct: 238 DRKTIGHDELGELADACSKMQNNLRLMVEEII-------TSATQLAHAVDEVSAVSEQTS 290

Query: 290 -----QSAAASAMAAAASEMTASIEEITRHAERALAMANQAETLAKDGGQVIHQVVSDMD 344
                Q      +A A +EM +++ E+ R+ E A   +  +   A  G Q +  V   + 
Sbjct: 291 QGMQIQQEEVMQIATAMAEMKSTVAEVARNTEVASDASRDSSQHANVGSQQMRAVNDSIQ 350

Query: 345 GIARSAQQSAQVIRTLDKESEAIYSIIQVIKGIADQTNLLALNAAIEAARAGEQGRGFAV 404
            + +   ++ Q +  L+ +++ I  ++ VI  IA+QTNLLALNAAIEAARAGEQGRGFAV
Sbjct: 351 HVNQEIGRTEQRVLELESQAQQINMVVDVISNIAEQTNLLALNAAIEAARAGEQGRGFAV 410

Query: 405 VADEVRNLAGRTSASTQEIASMVGRIQQSTREAVASMEEGVAQVDKGMAVTADVERSIRE 464
           VADEVR+LAG+T  ST +I  ++  +Q   ++A  +       ++  +  + + +++I +
Sbjct: 411 VADEVRSLAGKTQQSTGDIVEIIQNLQACAQKARETTNNSRELINHCVEQSQETQQAIEQ 470

Query: 465 ILQATLNTTEMVNDISRTIGEQSLASNEIAHQVEMIAQMSESNSRVIGQTASTTDELSSL 524
           I   +    +M   I+   GEQ   S E++  +E I + ++  ++     A +  ELS L
Sbjct: 471 IRHQSSQIADMTIQIASACGEQDSVSEELSRNIERINESAKQVAQGSSSAAQSCAELSQL 530

Query: 525 AGQLSQSVDRFRL 537
           A QL  +V RFRL
Sbjct: 531 ASQLQDTVQRFRL 543