Pairwise Alignments

Query, 537 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 433 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  182 bits (461), Expect = 3e-50
 Identities = 110/349 (31%), Positives = 188/349 (53%), Gaps = 5/349 (1%)

Query: 189 VVLIASLILLLAQGRWVILSIMGPLQTASRIADSIAHGNLSEPIVEPVRKDEASALIRSL 248
           ++++  ++LLL   R ++       Q  S +   +A  NLSEPI     KDE   + R L
Sbjct: 90  LLIVVFVVLLLFAARVMLRQT----QYLSDVIKLMAQRNLSEPIKMDC-KDEYGDVAREL 144

Query: 249 ATMQRDLRGMIDVVRSNAHGVNTTSEQLSHGCHEVAGSSQQQSAAASAMAAAASEMTASI 308
              +R L+ +I +    +  + + +E ++    E   S+Q++      +A A SEM++++
Sbjct: 145 EKTRRQLQDLIKLQIDASQELTSLTEVMTMSMSETKDSAQEEFNEIDQLATAMSEMSSTV 204

Query: 309 EEITRHAERALAMANQAETLAKDGGQVIHQVVSDMDGIARSAQQSAQVIRTLDKESEAIY 368
           + +  HA+ A ++   A   A+ G Q +   +S M  +++    SAQ +  +++   AI 
Sbjct: 205 QTVAEHAQNASSLTENASQQAQTGQQFVKSTISKMSELSKDISSSAQAVNQVEERVVAIS 264

Query: 369 SIIQVIKGIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAGRTSASTQEIASMVG 428
           S++  I+ I++QTNLLALNAAIEAARAGE GRGFAVVADEVRNLA RT  +T EI  M+ 
Sbjct: 265 SVVGTIRSISEQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAQRTQNATVEIQEMIS 324

Query: 429 RIQQSTREAVASMEEGVAQVDKGMAVTADVERSIREILQATLNTTEMVNDISRTIGEQSL 488
           ++Q S   AV  ME+ V Q   G+ +  +    +  I+       +M   I+   G+QS 
Sbjct: 325 QLQSSANSAVNLMEKSVVQAADGVELITNAGSELDGIVNQVQLLNDMNFQIAAAAGQQSN 384

Query: 489 ASNEIAHQVEMIAQMSESNSRVIGQTASTTDELSSLAGQLSQSVDRFRL 537
            + E+   +  + ++ E +  V+ +   T++ + S A +L + +  FR+
Sbjct: 385 VAEEMNENLNNVRELVEGSVTVMTELLETSEIMQSNAEELDRKITAFRV 433