Pairwise Alignments

Query, 537 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 672 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  193 bits (491), Expect = 2e-53
 Identities = 133/403 (33%), Positives = 213/403 (52%), Gaps = 15/403 (3%)

Query: 135 DDPDAARGELGTFNAAFSQLEDQMATLSELIENNTQQASVGTRQSISVANFTLGVVLIAS 194
           ++ D A   LG FN        Q AT  +L ++  +  SV  + +I      + VVL+A+
Sbjct: 285 NEVDKAMTILGAFN--------QTAT-DDLNQSLAEAGSVYQQGAIKAVVIGIAVVLLAT 335

Query: 195 LILLLAQGRWVILSIMGPLQTASRIADSIAHGNLSEPIVEPVRKDEASALIRSLATMQRD 254
            I     G  +  S+  P+    +  +S+  GN+++ I E    +E S L R + ++  +
Sbjct: 336 AI-----GYHIAHSVREPVTRILKTLESLTQGNMTQRI-EIRYNNEFSRLSRHINSLADN 389

Query: 255 LRGMIDVVRSNAHGVNTTSEQLSHGCHEVAGSSQQQSAAASAMAAAASEMTASIEEITRH 314
           L  ++  + S +  +  T+                Q    S++AAA +EM  S++E+   
Sbjct: 390 LHDILVKLNSASDDLTATASTNQTTSLSAQNKLNSQREQTSSVAAAMTEMAHSVQEVANS 449

Query: 315 AERALAMANQAETLAKDGGQVIHQVVSDMDGIARSAQQSAQVIRTLDKESEAIYSIIQVI 374
           A+ +LAM  Q ET ++ G Q++   +S +  +     +S + +  L K S  I SI+ VI
Sbjct: 450 AQNSLAMVQQVETASESGRQIMSTNISTIRQLETRLIESVEAVGDLRKMSSQIGSILDVI 509

Query: 375 KGIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAGRTSASTQEIASMVGRIQQST 434
           + IA+QTNLLALNAAIEAARAGEQGRGFAVVADEVR LA RT+ ST EI SM+  +Q S+
Sbjct: 510 RNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLAQRTTQSTSEIESMISNLQSSS 569

Query: 435 REAVASMEEGVAQVDKGMAVTADVERSIREILQATLNTTEMVNDISRTIGEQSLASNEIA 494
             A   +E  +  ++  +   +    ++ EI    +  + M   IS+  GEQ+  +  IA
Sbjct: 570 SLASKVIESCMQDMELSVEQASHANSAMEEIQALIIEISHMSTHISQAAGEQNETTTSIA 629

Query: 495 HQVEMIAQMSESNSRVIGQTASTTDELSSLAGQLSQSVDRFRL 537
             +E I  +S+ + + + Q A T+  L++LA Q S+ V RF+L
Sbjct: 630 RSIEDINHISDESYQAMSQIAQTSANLTALANQQSELVHRFKL 672