Pairwise Alignments

Query, 537 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  188 bits (478), Expect = 4e-52
 Identities = 126/416 (30%), Positives = 226/416 (54%), Gaps = 12/416 (2%)

Query: 127 ERIVTLALDDP-DAARGELGTFNAAFSQLEDQMATLSELIENNTQQ--ASVGTRQSISVA 183
           + ++T   DD        L TF A  S     +  L + +++N  Q  +SV T  S SVA
Sbjct: 134 QTLLTQGADDAYPILANSLSTFEALESDFTLLIGILHQAMDSNKVQILSSVKTLNSTSVA 193

Query: 184 NFTLGVVLIASLILLLAQGRWVILSIM-GPLQTASRIADSIAHGNLSEPIVEP-VRKDEA 241
           +    + ++A ++L+     W++  ++ GPL    + +++IA G+LS+ +    +  DE 
Sbjct: 194 S---NIAILAIMVLMT----WLLTRLICGPLAIVMKQSNAIAKGDLSQTMDRSSIGNDEL 246

Query: 242 SALIRSLATMQRDLRGMIDVVRSNAHGVNTTSEQLSHGCHEVAGSSQQQSAAASAMAAAA 301
             L  +   MQ++LR +ID + S    +++  E+++   ++ A   ++Q    + +A A 
Sbjct: 247 GTLANASEQMQQNLRQLIDEIISAVTQLSSAVEEMTQISNQSADGMKEQQYQITQVATAM 306

Query: 302 SEMTASIEEITRHAERALAMANQAETLAKDGGQVIHQVVSDMDGIARSAQQSAQVIRTLD 361
           ++M A++ ++ R+ E + + A  A   +++G +    +V  +  +A    ++ Q +  L+
Sbjct: 307 AQMKAAVADVARNTEDSASQAMAANHKSQEGARENASMVRSIQQVADIIGEAGQTVSELE 366

Query: 362 KESEAIYSIIQVIKGIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAGRTSASTQ 421
           ++S  I  ++ VI+ IADQTNLLALNAAIEAARAGE GRGFAVVADEVR LAGRT  ST 
Sbjct: 367 QQSSQINVVVDVIRSIADQTNLLALNAAIEAARAGESGRGFAVVADEVRTLAGRTQDSTG 426

Query: 422 EIASMVGRIQQSTREAVASMEEGVAQVDKGMAVTADVERSIREILQATLNTTEMVNDISR 481
           EI +++ ++Q   ++A  + E   + +DK +      +  +  I ++  N  ++   I+ 
Sbjct: 427 EITTIIEKLQVMAKQAKDATERSRSSIDKCVEQGNHSQSLMISIEESIANIADVGTQIAS 486

Query: 482 TIGEQSLASNEIAHQVEMIAQMSESNSRVIGQTASTTDELSSLAGQLSQSVDRFRL 537
              EQ   ++E++  VE I   S+  ++   QTA    EL+ LA  L  ++ RF++
Sbjct: 487 ACSEQDSVADELSRNVENIHLASQEVAQGSQQTAQACRELTQLAVSLQDTLRRFKI 542