Pairwise Alignments

Query, 537 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 642 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  193 bits (490), Expect = 2e-53
 Identities = 136/488 (27%), Positives = 236/488 (48%), Gaps = 29/488 (5%)

Query: 71  LGKSTSTKAQVSDSLKEHAEHFRQVLADNLKLPLDNTLKANLEKIKPSLDNYISTGERIV 130
           L +S   + +++  L+    +FR V    + +P     +   +     +    S   ++ 
Sbjct: 163 LDQSGIDQVKIAGDLRNGMTNFRLVFRRYISIPTAENRQITFDAADSLIAQVGSARNQL- 221

Query: 131 TLALDDPDAARGELGTFNAAFSQLEDQMATLSELIENNTQQASVGTRQSISVA------- 183
                 P+ A   +    AA  Q +  M ++S+L++ N Q      +QS+ +        
Sbjct: 222 ------PNKAGPAVDEALAALQQYKSLMVSISQLMQQNDQIRDSLRQQSMDIVTSAEKLM 275

Query: 184 ------------NFTLGVVLIASLILLLAQGRWVILS--IMGPLQTASRIADSIAHGNLS 229
                       +    ++ +A ++LLL     ++++  I  PL +    A  IA G+L+
Sbjct: 276 AGQVVSANKEKDSAVTQLLTVAVIVLLLGIFAAILITRQITRPLDSTVIAARRIADGDLT 335

Query: 230 EPIVEPVRKDEASALIRSLATMQRDLRGMIDVVRSNAHGVNTTSEQLSHGCHEVAGSSQQ 289
             +    R+DE   L  ++  M   LR +I  + +    + T +E+LS    + +    Q
Sbjct: 336 NDL-STTRQDELGLLQNTMQHMTVSLRTLIGGISNGVTQIATAAEELSAVSEQTSAGVTQ 394

Query: 290 QSAAASAMAAAASEMTASIEEITRHAERALAMANQAETLAKDGGQVIHQVVSDMDGIARS 349
           Q      +A A ++M ++++E+ ++ E A   A QA   A  G  V+     ++  +A  
Sbjct: 395 QKLEVDQVATAMNQMASTVQEVAQNTEDASQAARQASDRAAHGSSVVQHATREISQLAGE 454

Query: 350 AQQSAQVIRTLDKESEAIYSIIQVIKGIADQTNLLALNAAIEAARAGEQGRGFAVVADEV 409
             Q  + ++ L ++S+ I  +I VIK +A+QTNLLALNAAIEAARAGEQGRGFAVVADEV
Sbjct: 455 VGQLGEAMQRLIQDSDKIGGVIDVIKAVAEQTNLLALNAAIEAARAGEQGRGFAVVADEV 514

Query: 410 RNLAGRTSASTQEIASMVGRIQQSTREAVASMEEGVAQVDKGMAVTADVERSIREILQAT 469
           R+LA RT +ST EI +++  +Q  T  A   M     + +  +A+    E S+ EI  + 
Sbjct: 515 RSLAQRTQSSTTEIEALIKSLQDGTGAASELMNASRQRTEGTVALARQAEESLLEITHSI 574

Query: 470 LNTTEMVNDISRTIGEQSLASNEIAHQVEMIAQMSESNSRVIGQTASTTDELSSLAGQLS 529
           +   +M   IS    EQS  ++EI   V  +  +++ ++    Q+A++T EL+ L   L 
Sbjct: 575 VTIEQMSQQISAAAEEQSAVTDEINRSVISVRDIADQSATATEQSAASTVELARLGSNLQ 634

Query: 530 QSVDRFRL 537
             V RFR+
Sbjct: 635 DMVARFRI 642