Pairwise Alignments

Query, 537 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 542 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  197 bits (502), Expect = 6e-55
 Identities = 165/552 (29%), Positives = 271/552 (49%), Gaps = 41/552 (7%)

Query: 6   RLMLLIATGLLTALIMSLAGYLGNTRMGTAVQ----DSELSMTALRNHMEADMMHDALRA 61
           +LM       +  L +   G LG  R+  A++    ++ +S+      M A   H+    
Sbjct: 12  KLMAAFIVCAMITLAVGGLGMLGINRLSDALELTFSNNLVSVANTNETMTALTTHNRGLY 71

Query: 62  DVLSAMLVGLGKSTSTKAQVSDSLKEHAEHFRQVLADNLKLPLDNTLKANLEKIKPSLDN 121
            +L A      K  +T  ++  S+    E  ++V A     PL++  +A  ++    +  
Sbjct: 72  RLLDA------KDKATAEKMRQSINGELERAQKVYAIYRATPLEDDERAAGDQYDALMPA 125

Query: 122 YISTGERIVTLA----LDDPDAARGELGTFNAAFSQLEDQMATLSELIENNTQQASVGTR 177
           Y+S  + I  L     L+D   AR  L     A  +       L  +I++N +Q   G  
Sbjct: 126 YMSASQNIFDLQQAGKLED---ARNRLNAL--AEGEFNKARGYLQIMIDSNKRQIKEGAE 180

Query: 178 -----QSISVANFTLGVVLIASLILLLAQGRWVILSIMGPLQTASRIADSIAHGNLSEPI 232
                QS SV   T G+V+   + ++L  G  +   I  PL++A  +A  IA G+L++  
Sbjct: 181 AADRLQSTSVFMLTAGIVIAFVVAIML--GILITRMITRPLRSAIEVAQRIASGDLTQS- 237

Query: 233 VEPVRKDEASALIRSLATMQRDLRGMIDVVRSNAHGVNTTSEQLSHGCHEVAGSSQQQSA 292
           V   R DEA  L+ ++ TMQ +L+  I  + S +  + + +E+L     E      +Q+ 
Sbjct: 238 VSSTRGDEAGHLLNAIGTMQGNLKRTIQEISSASDQLASAAEELGAVTEESTRGLTRQND 297

Query: 293 AASAMAAAASEMTASIEEITRHAERALAMANQAETLAKDGGQVIHQVVSDMDGIARSAQQ 352
                A A +EMTA++EE+ R+A   ++ + ++++LA D      QV + + GI     +
Sbjct: 298 EIQQAATAVNEMTAAVEEVARNA---VSTSEESKSLATDAANGRGQVDNTVKGIGTMVSE 354

Query: 353 ---SAQVIRTLDKESEAIYSIIQVIKGIADQTNLLALNAAIEAARAGEQGRGFAVVADEV 409
              S   + TL      I  +++VI+ IA+QTNLLALNAAIEAARAGEQGRGFAVVADEV
Sbjct: 355 ITESTGSVTTLAGHVRDISKVLEVIRSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEV 414

Query: 410 RNLAGRTSASTQEIASMVGRIQQSTREAVASMEEGVAQVDKGMAVTADVERSIREILQAT 469
           R LA RT AST EI  M+G +Q     AVA+M + +A        T ++ +     L+  
Sbjct: 415 RALAHRTQASTVEIEGMIGTVQSGADGAVAAMSKSLATATN----TQELAQRAGSALEKI 470

Query: 470 LNTTEMVNDISRTIG----EQSLASNEIAHQVEMIAQMSESNSRVIGQTASTTDELSSLA 525
            +   M+N+ +  I     EQ+  + E+   +  I ++S  ++    QT++++ ELS LA
Sbjct: 471 TSGVGMINERNMVIASASEEQAQVAREVDRNLVNIQELSAQSAAGANQTSASSQELSRLA 530

Query: 526 GQLSQSVDRFRL 537
              +  V +F+L
Sbjct: 531 TSFNTMVAQFKL 542