Pairwise Alignments

Query, 451 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 426 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

 Score =  325 bits (834), Expect = 1e-93
 Identities = 181/408 (44%), Positives = 252/408 (61%), Gaps = 3/408 (0%)

Query: 23  LIAALERSMAVVEFDLNGRVLRANDNFLKTLGYNASQLTGKSHRDFCPPALTSSPAYSQF 82
           ++ +L   +A +EFD +G V+ AN  FL  +GY   +LTGK HR FC PA   S  Y QF
Sbjct: 19  IVQSLSEHIASIEFDTSGNVISANPLFLNAVGYRLEELTGKHHRIFCSPAECQSQQYQQF 78

Query: 83  WSDLKAGKFVSGTFKRVDSNGNTIWLEASYNPVLDERGQVLKVVKYALDVTSKVEQEAAT 142
           W+ L  GK  SGTF R   +G+ + LEA+Y P+  + G+V  V+K A DVT +     + 
Sbjct: 79  WTSLAQGKSHSGTFMRYKKDGSLLVLEATYFPIKTD-GKVSSVMKIASDVTEQYLHAESQ 137

Query: 143 RSKLTALDRAMAVIEFDLNGQVLDANVNFLNVMGYTLAEIKGKHHRLFCEPALINSHEYT 202
           R  LTAL++  AVIEF+ +G ++ AN  FL  MGY+L +IKGKHHRLFC       H   
Sbjct: 138 RDLLTALNQNFAVIEFEPDGTIISANSAFLKTMGYSLDQIKGKHHRLFCFDEFYQQHP-- 195

Query: 203 DFWRRLNSGEFFAGQFKRLGKQGRVVWLEASYNPVYDGDGKLTKIVKFASDITERVEKFE 262
            FW+ L +G+ ++G+F R    G  VW++ASY+PV D + K+ KIVKFASDIT  V + +
Sbjct: 196 TFWKSLAAGQAYSGRFLRKNSYGSQVWIQASYSPVKDQNNKVYKIVKFASDITAEVLREQ 255

Query: 263 EDSRGASRAYHISSETERFAEHGTQVIQETASEMRRIADNIGASARLVGQLGDRSEQITA 322
           + +  A+ AY  S ET + A+ G  V+Q++     ++  NI  S + + QL   S+ ++ 
Sbjct: 256 QVTDAANIAYSTSVETSQVAQGGNHVLQDSVRLAEKMVGNIEQSLQQIEQLVVLSKDVSE 315

Query: 323 IVNTIRGIADQTNLLALNAAIEAARAGDQGRGFAVVADEVRQLAGRTSRSTAEIAEMIGM 382
           IV TI GIADQTNLLALNAAIEAARAG+QGRGFAVVADEVRQLA RTS++T EI +++  
Sbjct: 316 IVKTISGIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRQLASRTSKATEEINQVVNK 375

Query: 383 ILSETRDAVTSMNATQEGAQRGVSLADQAGSVILQIRTSTSDAVEAVS 430
            LS T    +S++   + A        +  +++ QI     +   AVS
Sbjct: 376 NLSLTEAVTSSISQVSQIANETNGRIVEVSTIMEQIYQGAENVSSAVS 423



 Score =  105 bits (263), Expect = 2e-27
 Identities = 50/119 (42%), Positives = 78/119 (65%), Gaps = 2/119 (1%)

Query: 21  KGLIAALERSMAVVEFDLNGRVLRANDNFLKTLGYNASQLTGKSHRDFCPPALTSSPAYS 80
           + L+ AL ++ AV+EF+ +G ++ AN  FLKT+GY+  Q+ GK HR FC         + 
Sbjct: 138 RDLLTALNQNFAVIEFEPDGTIISANSAFLKTMGYSLDQIKGKHHRLFCFDEFYQQ--HP 195

Query: 81  QFWSDLKAGKFVSGTFKRVDSNGNTIWLEASYNPVLDERGQVLKVVKYALDVTSKVEQE 139
            FW  L AG+  SG F R +S G+ +W++ASY+PV D+  +V K+VK+A D+T++V +E
Sbjct: 196 TFWKSLAAGQAYSGRFLRKNSYGSQVWIQASYSPVKDQNNKVYKIVKFASDITAEVLRE 254