Pairwise Alignments

Query, 451 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 432 a.a., methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor (RefSeq) from Shewanella sp. ANA-3

 Score =  324 bits (831), Expect = 3e-93
 Identities = 180/434 (41%), Positives = 256/434 (58%), Gaps = 5/434 (1%)

Query: 1   MFNTALKTALSARTAEVTEFKGLIAALERSMAVVEFDLNGRVLRANDNFLKTLGYNASQL 60
           MFN++L+  L+    +  E + ++ +++ S+A +EF  +G +L AN  FLK +GY+  ++
Sbjct: 1   MFNSSLRKDLAESETKRREAEAVVDSIKASIATIEFTPDGIILDANPLFLKAVGYSLDEI 60

Query: 61  TGKSHRDFCPPALTSSPAYSQFWSDLKAGKFVSGTFKRVDSNGNTIWLEASYNPV-LDER 119
            GK H+ FC     ++  Y QFW +LK G+   G F RV  NG  IWL A+Y P+ LD  
Sbjct: 61  VGKHHKLFCAEYYVNTSEYQQFWRELKQGQAKEGKFPRVHKNGQEIWLRATYFPIKLD-- 118

Query: 120 GQVLKVVKYALDVTSKVEQEAATRSKLTALDRAMAVIEFDLNGQVLDANVNFLNVMGYTL 179
           G++ K++K A  +T    Q  A  +  +AL ++ A+IEF   G +L+AN NFL  MGY+ 
Sbjct: 119 GKITKIMKTAAVITEDKYQLDAQAALFSALQKSQAIIEFSPEGNILNANANFLRTMGYSK 178

Query: 180 AEIKGKHHRLFCEPALINSHEYTDFWRRLNSGEFFAGQFKRLGKQGRVVWLEASYNPVYD 239
            +++GKHHRLFC       + +  FW  L  G++  G F+R    G  +WLEA YNPV D
Sbjct: 179 EQLQGKHHRLFCFDNFYQDNPH--FWDDLRRGQYKKGLFQRKNAYGDSIWLEAVYNPVMD 236

Query: 240 GDGKLTKIVKFASDITERVEKFEEDSRGASRAYHISSETERFAEHGTQVIQETASEMRRI 299
             GK+ K++KFASDIT+R+ K       A+ A+  S  T   A  G Q++  T +    I
Sbjct: 237 DHGKVVKVIKFASDITQRIIKSHAIRDAANIAHATSQSTVEQANRGVQLLDATVNTSNAI 296

Query: 300 ADNIGASARLVGQLGDRSEQITAIVNTIRGIADQTNLLALNAAIEAARAGDQGRGFAVVA 359
           A     +   + +L ++S+ I AIV TI  IADQTNLLALNAAIEAARAG+QGRGFAVVA
Sbjct: 297 AAQTHKTTESMLKLNEQSQSIQAIVATISAIADQTNLLALNAAIEAARAGEQGRGFAVVA 356

Query: 360 DEVRQLAGRTSRSTAEIAEMIGMILSETRDAVTSMNATQEGAQRGVSLADQAGSVILQIR 419
           DEVRQLA RTS+ST EIA ++      T  A + MN  +  A+ G     +  +V+  IR
Sbjct: 357 DEVRQLAARTSKSTGEIAAVVDKNSQLTASATSMMNEVERIAEEGKQQLAEVTAVMGDIR 416

Query: 420 TSTSDAVEAVSMFA 433
           T   +  E VS  +
Sbjct: 417 TGAENVAETVSQLS 430