Pairwise Alignments

Query, 333 a.a., LacI family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 334 a.a., transcriptional repressor PurR from Vibrio cholerae E7946 ATCC 55056

 Score =  197 bits (500), Expect = 4e-55
 Identities = 122/334 (36%), Positives = 175/334 (52%), Gaps = 3/334 (0%)

Query: 1   MVTMDDVASRAGVSTSTVSHVLNGTRKVSPATVLAVQQAIQALGYIPNTLARSLARSSTN 60
           M TM D+A  AGVSTSTVSHV+N +R VS      V  A Q L Y P+ LARSL  + T 
Sbjct: 1   MATMKDIARLAGVSTSTVSHVINKSRFVSDEIAERVNNAAQQLNYAPSALARSLKMNRTK 60

Query: 61  TMGVAISALSNHYFSETVHAIETECAKNGYMMLFVDTHDDPEQELRVVTALHHRRVDGIV 120
           T+G+ ++  +N +F E V  +E  C   GY ++  +T  D ++    +  L  +RVDG++
Sbjct: 61  TIGMLVTTSTNPFFGEVVKGVERSCYHQGYNLILCNTEGDNQRMKASINTLLQKRVDGLL 120

Query: 121 LAPS--NGSKALEYLRANEIPAVLVD-RMMSDQFDQIGVDNAQPTQALIQHLIAHGHRRI 177
           L  S   G +   + R  +IP V++D   +    D+I  ++ Q      +HLI  GH+ I
Sbjct: 121 LMCSTLEGERLDVFDRYPDIPIVVMDWGPILFASDKIQDNSLQGGYMAAKHLIECGHKEI 180

Query: 178 GFIAGREGFSTTDERVAGYRAALLAAGLAFDPQLLVNGGSNTEPARKATVQLLGLAAPPT 237
           G I G         R  GY+ AL  AG+A +P  +V      E   +A  +L      P+
Sbjct: 181 GCITGPLIRHQAQMRYEGYKRALAEAGIAINPDWIVESDFECEGGYQAFEKLYQRGKLPS 240

Query: 238 AIMAGNNLMTLGAMQALRDAQITVPGQMALVGFDDFDWADFFEPRLTLIAQPVQALGAQA 297
           A+   N++M +G +QA     + VP  ++L+G+DD   A F  P LT I QP   LG  A
Sbjct: 241 ALFVSNDMMAMGVIQAASQRGLRVPDDLSLIGYDDVHIAKFMTPALTTIHQPKYRLGKAA 300

Query: 298 VHLLLQRMASPDAPPHSVRLTPTLQVRNSCGCIG 331
           V  LL R+ +PD     V+L PTL VRNS   +G
Sbjct: 301 VDTLLYRLENPDTTAQVVQLEPTLVVRNSVRKLG 334