Pairwise Alignments

Query, 333 a.a., LacI family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 337 a.a., transcriptional regulator, LacI family from Pseudomonas syringae pv. syringae B728a

 Score =  190 bits (483), Expect = 4e-53
 Identities = 121/329 (36%), Positives = 176/329 (53%), Gaps = 6/329 (1%)

Query: 2   VTMDDVASRAGVSTSTVSHVLNGTRKVSPATVLAVQQAIQALGYIPNTLARSLARSSTNT 61
           VT+ DVA+ AG+S + VS  LN +  + P T   +  AI+AL Y  N+LAR L++  + T
Sbjct: 5   VTLKDVANHAGLSKAAVSRYLNRSISLPPETAQRIDLAIKALDYRGNSLARRLSKGGSET 64

Query: 62  MGVAISALSNHYFSETVHAIETECAKNGYMMLFVDTHDDPEQELRVVTALHHRRVDGIVL 121
           +G+ +  ++N +F+E   A E E + +GY ++   T +  E+E   V  L  R VDG++L
Sbjct: 65  IGLVLPDIANPFFAELADAAEEEASAHGYNLVLCVTRNLLERESTFVRWLDSRNVDGLLL 124

Query: 122 A---PSNGSKALEYLRANEIPAVLVDR-MMSDQFDQIGVDNAQPTQALIQHLIAHGHRRI 177
               P +G+ A + +    I  +L+D  +      ++  DN Q  +    +LI HGHRRI
Sbjct: 125 VSNRPDDGTLASQLMSYRNI--ILLDEDVPGTSQPKVFADNHQGGRLATDYLIRHGHRRI 182

Query: 178 GFIAGREGFSTTDERVAGYRAALLAAGLAFDPQLLVNGGSNTEPARKATVQLLGLAAPPT 237
             ++G     +  ER AGYR AL  A +A  P+ L  G  + E  R AT QLL L  PP 
Sbjct: 183 AHVSGPSALMSARERYAGYREALALASIAEVPEYLCFGDYSREFGRIATAQLLTLPDPPE 242

Query: 238 AIMAGNNLMTLGAMQALRDAQITVPGQMALVGFDDFDWADFFEPRLTLIAQPVQALGAQA 297
           AI A ++ + LG +  LR+  I+VPG M+LVGFDD  +A    P L  I Q  + LG   
Sbjct: 243 AIFAASDFIALGVLDVLRERTISVPGAMSLVGFDDAVYASLLTPPLCTIRQSSRELGRLG 302

Query: 298 VHLLLQRMASPDAPPHSVRLTPTLQVRNS 326
           V  LLQRM   D     VR+   L  R +
Sbjct: 303 VAQLLQRMTGGDCAQDIVRVPVELVCRGT 331