Pairwise Alignments

Query, 325 a.a., ribose ABC transporter permease from Pseudomonas simiae WCS417

Subject, 320 a.a., sugar uptake ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  214 bits (545), Expect = 2e-60
 Identities = 128/312 (41%), Positives = 186/312 (59%), Gaps = 7/312 (2%)

Query: 8   TTNKAERARELMRTVGMLPVLILLLVGFALASENFLTMQNLSIISQQASVNVVLAAGMTF 67
           T  KA   R L +  G+   L++L + F+  +  F+T+ N   I QQ +V  + A GMT+
Sbjct: 5   TAAKAALVRALKQYGGIFLSLVMLCIVFSFFNPRFMTVVNFMNILQQVAVVAIAAFGMTW 64

Query: 68  VILTAGIDLSVGAILAASAVVALQASMSPQFGMF---GIAAGIGFGLLLGLVNGGLIAFM 124
           VIL   IDLSVG+I+A + +V  Q      FGM     IA  +  G L+G++NG L A +
Sbjct: 65  VILLGEIDLSVGSIIAVAGMVGAQCFA---FGMGFAPAIALTLAAGALMGMLNGVLTAKL 121

Query: 125 RLPPFIVTLGALTAMRGLARLLADDKTVFNPDLPFAFIGNDSLLGVPWLVIIAVAVVALS 184
            LP FIVT+  +   RG+  L  +       +  +  IG +S LG+P ++ +   +  ++
Sbjct: 122 LLPSFIVTVATMGIYRGMVSLPTNGAPAMIENETWTAIGTESFLGLPIIIWVVAVLFVIN 181

Query: 185 WFILRRTVMGVQIYSVGGNPEAARLSGIKVWKVLLFVYAMSGALAGLGAVMSASRLFAAN 244
             +L +T  G + Y  GGN EAA  SGIKV ++ + ++ +SG +A +  V+ +SRLF+A 
Sbjct: 182 QIVLSKTSFGRRAYLTGGNREAAVYSGIKVDRLKILIFMISGVMAAISGVLLSSRLFSAQ 241

Query: 245 GLQLGQSYELDAIAAVILGGTSFTGGVGTIGGTLIGALIIAVLTNGLVLLGVSDIWQYII 304
               G SYELDAIAA +LGGTS  GGVGT+ GTLIGALII V+ NG+ +L V   +Q I+
Sbjct: 242 -TNAGMSYELDAIAAAVLGGTSLAGGVGTMVGTLIGALIIGVMNNGMNMLSVPYFYQLIV 300

Query: 305 KGIVIIGAVALD 316
           KG+VI+ AV LD
Sbjct: 301 KGLVILVAVWLD 312