Pairwise Alignments

Query, 325 a.a., ribose ABC transporter permease from Pseudomonas simiae WCS417

Subject, 338 a.a., inner-membrane translocator (NCBI) from Rhodospirillum rubrum S1H

 Score =  215 bits (548), Expect = 1e-60
 Identities = 133/303 (43%), Positives = 180/303 (59%), Gaps = 15/303 (4%)

Query: 30  LLLVGFALASENFLTMQNLSIISQQASVNVVLAAGMTFVILTAGIDLSVGAILAASAVVA 89
           L +V  A     FLT+ NL +I  Q SVN VLA GMTFV+++AGIDLSVG++LA S ++A
Sbjct: 36  LKVVQGAWPENTFLTVNNLMLILHQISVNGVLAVGMTFVVISAGIDLSVGSVLAFSGMMA 95

Query: 90  LQASMSPQFG-----------MFGIAAGIGFGLLLGLVNGGLIAFMRLPPFIVTLGALTA 138
             ASM+ +             +F I A +G G L G ++G +IA  R+  FI TLG L A
Sbjct: 96  --ASMATRSVGVTPWSDTYPVIFPIIAALGVGALCGGLSGWIIARFRIQAFIATLGMLLA 153

Query: 139 MRGLARLLADDKTVFNPDLPFAFIGNDSLLGV-PWLVIIAVAVVALSWFILRRTVMGVQI 197
            RG    +     +      F + G   L  V P  V+I   V  L+W IL +TV G  +
Sbjct: 154 ARGFTMSVTGGNPISGLSPDFRWFGTGKLFEVIPVPVVILALVFLLAWVILNKTVFGRYV 213

Query: 198 YSVGGNPEAARLSGIKVWKVLLFVYAMSGALAGLGAVMSASRLFAANGLQLGQSYELDAI 257
           Y+VGGN ++AR SGI    +L++VY ++G LAG+  V+  ++  +A     G SYELDAI
Sbjct: 214 YAVGGNEKSARTSGINTGAILIWVYVVAGFLAGVAGVILTAKTGSAQ-TSAGSSYELDAI 272

Query: 258 AAVILGGTSFTGGVGTIGGTLIGALIIAVLTNGLVLLGVSDIWQYIIKGIVIIGAVALDR 317
           AAV++GG S  GGVG + GT  GALII V+ NGL +LGV   +Q IIKG +I+ AV LD 
Sbjct: 273 AAVVIGGASLAGGVGRLTGTFFGALIIGVMNNGLDILGVQSFYQLIIKGGLIVVAVILDP 332

Query: 318 YRQ 320
            R+
Sbjct: 333 SRK 335