Pairwise Alignments

Query, 510 a.a., D-ribose transporter ATP-binding protein from Pseudomonas simiae WCS417

Subject, 497 a.a., sugar uptake ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  367 bits (941), Expect = e-106
 Identities = 210/480 (43%), Positives = 297/480 (61%), Gaps = 9/480 (1%)

Query: 6   LLEMQGISKTFNGLRVLKTVGLKVYPGEIHALMGENGAGKSTLMKILSGAYQADPGGEIR 65
           LL MQGI K+FNG+  L+   L+V   E+ AL+G+NGAGKSTL+KIL+GAY+ D G  + 
Sbjct: 2   LLSMQGICKSFNGIPALRAASLEVGEAEVMALVGQNGAGKSTLIKILTGAYRRDEGAVV- 60

Query: 66  IAGQLIPTFDPATAKALGIAVIYQELSLCPNLSVAENIYLGRELRRGWTIDRKGMEAGCI 125
            AG+ +    PA ++A GIA IYQE++L P  SVAENIYL RE RR   IDR+ M  G  
Sbjct: 61  FAGEGVSFSMPAESQARGIATIYQEINLAPQRSVAENIYLSREPRRFGLIDRRAMRDGAA 120

Query: 126 EVLQRLGAEFTPATRVSSLSIAERQLVEIARALHAHAKILVMDEPTTPLSSRETDRLFAL 185
            VL+    E      V+  S A RQ+V IARA+   A++++MDEPT+ L  RE   LF  
Sbjct: 121 AVLRAFNLEIDVDQPVAGFSAATRQMVAIARAVTQKARLVIMDEPTSSLDEREVGILFDT 180

Query: 186 IKQLRSQGLAIIYISHRMAEIYALSDRVSVLRDGHYIGELTRDALSAEALVKMMVGRDLS 245
           I+ L+  G+++++I HR+ E+Y + DRV+++RDG  +       +   ALV+ M+G++L+
Sbjct: 181 IRTLKRGGVSVVFIGHRLEELYRICDRVTIMRDGKTVATAAMADMPKLALVRHMLGKELA 240

Query: 246 GF----YKKEHAAYNPGNVVMRVRDMADGKRVRHCSFDLHAGEVLGIAGLVGAGRTELAR 301
            F       +  A  P  V + VR+   G RVR  S  +  GE+ G+AGL+G+GRTE A 
Sbjct: 241 AFEAIAKDADEGAQRP--VRLSVRNAGAGVRVRDVSLTVREGEISGLAGLLGSGRTETAN 298

Query: 302 LIFAADPRTSGTLEVVGKAVTPLRTPADAIRAGVVYLTEDRKAQGLFLDMSVADNINVCA 361
           LIF AD    G +   G+A    R PADAI  G+  + EDRK  G+  DMS+ +N+ + A
Sbjct: 299 LIFGADRLQRGEIRYNGEA-RAYRQPADAIADGIGLVAEDRKVDGIIPDMSIRENMTL-A 356

Query: 362 CVPDAHAGGVLDRDHALQRSNDAIKSLSIRVASGKVNAGALSGGNQQKVLLARLLEVKPH 421
            +P     G++DR    +     I +L+I+  S       LSGGNQQKVLL R L   P 
Sbjct: 357 LLPKLARAGIVDRARQDEIVERYITALAIKCTSPDQPIKELSGGNQQKVLLGRWLCTDPK 416

Query: 422 VLILDEPTRGVDIGSKSEIYRIINQLAQAGIGIVVISSELPEIIGTCDRVLIMREGQLVA 481
           +LI+DEPTRG+DIG+KSEI R++ +LA  G+G+++ISSEL E++   DRV ++ +G  VA
Sbjct: 417 LLIVDEPTRGIDIGAKSEILRLLRRLADEGLGVLMISSELEELLAAADRVTVLSDGTSVA 476



 Score = 94.4 bits (233), Expect = 9e-24
 Identities = 72/228 (31%), Positives = 114/228 (50%), Gaps = 8/228 (3%)

Query: 18  GLRVLKTVGLKVYPGEIHALMGENGAGKSTLMKILSGAYQADPGGEIRIAGQLIPTFDPA 77
           G+RV + V L V  GEI  L G  G+G++    ++ GA +   G EIR  G+      PA
Sbjct: 267 GVRV-RDVSLTVREGEISGLAGLLGSGRTETANLIFGADRLQRG-EIRYNGEARAYRQPA 324

Query: 78  TAKALGIAVIYQELS---LCPNLSVAENIYLGR--ELRRGWTIDRKGMEAGCIEVLQRLG 132
            A A GI ++ ++     + P++S+ EN+ L    +L R   +DR   +      +  L 
Sbjct: 325 DAIADGIGLVAEDRKVDGIIPDMSIRENMTLALLPKLARAGIVDRARQDEIVERYITALA 384

Query: 133 AEFT-PATRVSSLSIAERQLVEIARALHAHAKILVMDEPTTPLSSRETDRLFALIKQLRS 191
            + T P   +  LS   +Q V + R L    K+L++DEPT  +       +  L+++L  
Sbjct: 385 IKCTSPDQPIKELSGGNQQKVLLGRWLCTDPKLLIVDEPTRGIDIGAKSEILRLLRRLAD 444

Query: 192 QGLAIIYISHRMAEIYALSDRVSVLRDGHYIGELTRDALSAEALVKMM 239
           +GL ++ IS  + E+ A +DRV+VL DG  +  L R  LS  AL   M
Sbjct: 445 EGLGVLMISSELEELLAAADRVTVLSDGTSVAVLPRKELSEAALFAAM 492