Pairwise Alignments

Query, 510 a.a., D-ribose transporter ATP-binding protein from Pseudomonas simiae WCS417

Subject, 504 a.a., sugar uptake ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  379 bits (972), Expect = e-109
 Identities = 211/500 (42%), Positives = 324/500 (64%), Gaps = 13/500 (2%)

Query: 6   LLEMQGISKTFNGLRVLKTVGLKVYPGEIHALMGENGAGKSTLMKILSGAYQADPGGEIR 65
           L  ++ ISK+F G+  L++V   V PGE+HAL+GENGAGKSTLM++L G      G E+ 
Sbjct: 5   LANLKSISKSFGGIHALRSVNFDVRPGEVHALLGENGAGKSTLMRVLGGEIIPSQG-EVV 63

Query: 66  IAGQLIPTFDPATAKALGIAVIYQELSLCPNLSVAENIYLGRELRRGWTIDRKGMEAGCI 125
           I G+     DP  A+ALGI VI+QEL+L P+LSVAENI+LG EL     I R  +     
Sbjct: 64  INGKRTELRDPRDARALGIVVIHQELALAPDLSVAENIFLG-ELPT--LISRFSLRRRAK 120

Query: 126 EVLQRLGAEFTPATRVSSLSIAERQLVEIARALHAHAKILVMDEPTTPLSSRETDRLFAL 185
           +++ RLG +  P   V +LS+A +Q+VEIA+AL    KI+V DEPT  L +++  +L  +
Sbjct: 121 QLIDRLGFDIDPGRLVGTLSVAHQQVVEIAKALSQDIKIIVFDEPTAVLGAQDAMKLHQI 180

Query: 186 IKQLRSQGLAIIYISHRMAEIYALSDRVSVLRDGHYIGELTRDALSAEALVKMMVGRDLS 245
           I+ LR +G+ I+YISHR+ E++ ++DR++V++DG  +G +    +  + +++MMVGR ++
Sbjct: 181 IRGLRDRGVGIVYISHRLDEVFDIADRMTVMKDGETVGTVATTDVKIDDIIRMMVGRPIA 240

Query: 246 GFYKKEHAAYNPGNVVMRVRDMADGKRVRHCSFDLHAGEVLGIAGLVGAGRTELARLIFA 305
             +  E +    G  ++ V+ +  G+ VR  SF + AGE++G+ GL+G+GRTE+AR IF 
Sbjct: 241 NMF-PERSQRTIGAELLNVKKLNAGRMVRDVSFSVRAGEIVGLGGLIGSGRTEVARAIFG 299

Query: 306 ADPRTSGTLEVVGKAVTPLRTPADAIRAGVVYLTEDRKAQGLFLDMSVADNINVCACVPD 365
           ADP  SGT+ + GKA+  L++P DA++AG+  + EDRK  G+ +D  +  N  +      
Sbjct: 300 ADPLDSGTISLKGKAL-KLKSPRDAVKAGIGLVPEDRKEHGVVIDKPIRVNATMARMSSV 358

Query: 366 AHAGGVLDRDHALQRSNDAIKSLSIRVASGKVNA--GALSGGNQQKVLLARLLEVKPHVL 423
            +A G L    AL+R++      S+R+ +  ++A   +LSGGNQQKV+LA+       V+
Sbjct: 359 VNALGFL--KPALERTDVTALGKSLRLKASSIDAPVSSLSGGNQQKVVLAKWFHAGGDVI 416

Query: 424 ILDEPTRGVDIGSKSEIYRIINQLAQAGIGIVVISSELPEIIGTCDRVLIMREGQLVAEV 483
           ILDEPTRGVD+G+K+EIY +IN+LA+ G  ++VISSE  E+ G CDRVL M +GQ+  E+
Sbjct: 417 ILDEPTRGVDVGAKAEIYALINKLAEDGKAVLVISSEHQELFGLCDRVLAMGQGQIRGEL 476

Query: 484 GGASGQAISQERIIDLATGG 503
             ++    S+E ++ L+  G
Sbjct: 477 TPSN---YSEENLLGLSMMG 493