Pairwise Alignments

Query, 510 a.a., D-ribose transporter ATP-binding protein from Pseudomonas simiae WCS417

Subject, 512 a.a., sugar ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  403 bits (1035), Expect = e-117
 Identities = 220/504 (43%), Positives = 336/504 (66%), Gaps = 10/504 (1%)

Query: 1   MSLEPLLEMQGISKTFNGLRVLKTVGLKVYPGEIHALMGENGAGKSTLMKILSGAYQADP 60
           M+ E +LE++ +SK F  ++ L  V  ++  GE+HAL GENGAGKSTLM +++G  Q   
Sbjct: 1   MTSETVLEIRNVSKHFGAVKALTAVDFRLARGEVHALCGENGAGKSTLMNVIAGVLQPSE 60

Query: 61  GGEIRIAGQLIPTFDPATAKALGIAVIYQELSLCPNLSVAENIYLGR-ELRRGWTIDRKG 119
           G E+ I G  +    PA A++LGIA+++QE++LCP+ ++AEN+++     RR   ++   
Sbjct: 61  G-EVLIEGAPVKIASPAVAQSLGIALVHQEIALCPDATIAENMFMAATNRRRSALMNYAQ 119

Query: 120 MEAGCIEVLQRLGAEFTPATRVSSLSIAERQLVEIARALHAHAKILVMDEPTTPLSSRET 179
           +E     V+ RL A    + +V  L I+ +QLVEIA+AL    ++L+ DEPT  L+  E 
Sbjct: 120 LERDAQAVMNRL-APIDVSQKVGDLPISSQQLVEIAKALTLDCRVLIFDEPTAALTETEA 178

Query: 180 DRLFALIKQLRSQGLAIIYISHRMAEIYALSDRVSVLRDGHYIGELTRDALSAEALVKMM 239
             LF +I+ L+++G++IIYISHRMAE+++L DRV+V RDG Y+       ++ + +V++M
Sbjct: 179 QVLFGIIRDLKARGISIIYISHRMAEVFSLCDRVTVFRDGRYVATEMVSDVTPDDVVRLM 238

Query: 240 VGRDLSGFYK-KEHAAYNPGNVVMRVRDMADGKRVRHCSFDLHAGEVLGIAGLVGAGRTE 298
           VGR++S  Y  K+ ++   G  ++ VRD+  G+R R  SF+L  GE+LG+ GL+G+GRTE
Sbjct: 239 VGREISQLYPDKQPSSERLGEPILSVRDLG-GERFRDVSFELRYGEILGVGGLIGSGRTE 297

Query: 299 LARLIFAADPRTSGTLEVVGKAVTPLRTPADAIRAGVVYLTEDRKAQGLFLDMSVADNIN 358
           +A  I A  P T G + +  K V  LR  +DA +AGVVYL+EDRK  G+FLD+S+A NI 
Sbjct: 298 IAEGICALRPVTQGEIRLHDK-VLRLRRYSDAAKAGVVYLSEDRKGSGVFLDLSIAQNI- 355

Query: 359 VCACVPDAHAGGVLDRDHALQRSNDAIKSLSIRVASGKVNAGALSGGNQQKVLLARLLEV 418
               +    + G+L+       + D  + L +R+    +   +LSGGNQQKV +A+ L V
Sbjct: 356 AALDLKALTSLGLLNSREERALAEDLTRRLGVRMGGVDMPVSSLSGGNQQKVAIAKQLAV 415

Query: 419 KPHVLILDEPTRGVDIGSKSEIYRIINQLAQAGIGIVVISSELPEIIGTCDRVLIMREGQ 478
            P V+++DEPTRG+D+G+KSEI+R++ +LA+AGIGI+VISSELPE+IG CDRVL++REG+
Sbjct: 416 DPKVILMDEPTRGIDVGAKSEIHRLLRELARAGIGILVISSELPELIGLCDRVLVVREGR 475

Query: 479 LVAEVGGASGQAISQERIIDLATG 502
           +  EV   SG  +++E I+ LA+G
Sbjct: 476 IAGEV---SGNEMTEEVIMRLASG 496