Pairwise Alignments

Query, 232 a.a., nickel permease from Pseudomonas simiae WCS417

Subject, 223 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  115 bits (287), Expect = 9e-31
 Identities = 66/213 (30%), Positives = 118/213 (55%), Gaps = 10/213 (4%)

Query: 11  LIAKGLQTTLSLLVISALLGFALAVLVALARLSRRKWLARGAQAYTSVLRGTPLLIQIYI 70
           ++ K L TTL +     +    LA+ +A  R+ +   L   +Q Y S  RGTPLL+Q+++
Sbjct: 14  ILLKYLGTTLEMASWGLVFALILALFLANIRVFKVPVLDPLSQLYISFFRGTPLLVQLFL 73

Query: 71  FYYGLGSLFAQFPMIRGSFLWPYLRDGYWYIVFALVLSVGAYVGEVIRGGLLAVPKGEME 130
            YYGL  +F   P++ G        D +   V  L L   AY+ E IR  ++ + + +ME
Sbjct: 74  LYYGLPQVF---PLLVGL-------DAFSAAVIGLTLHFAAYMAESIRAAIIGIDRSQME 123

Query: 131 AASAFGMTPRQALLRVRLPRAMRLLLPTLAGETVMLLKSTALASTIAVVDLLGAANVVRA 190
           A+ + GMT  QA+ R+ LP+A R+ LP+L    + ++KST+LA T+ V +++  A +  +
Sbjct: 124 ASLSVGMTTSQAMRRIILPQATRVALPSLMNYFIDMIKSTSLAFTLGVAEIMAKAQMEAS 183

Query: 191 QTLQIYQPLLLVAAVYLCLTFLIEGVYAIAERR 223
            + + ++  L VA +Y  +  ++  + + AE++
Sbjct: 184 SSFRFFEAFLAVALIYWVVVLVLTRLQSWAEQK 216