Pairwise Alignments

Query, 284 a.a., amino acid ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 260 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  138 bits (348), Expect = 1e-37
 Identities = 88/256 (34%), Positives = 131/256 (51%), Gaps = 6/256 (2%)

Query: 6   MATWLGSAVLMLA--AGFSWAAE-KPIVFAVAAEPYPPFTVKGGNGQWSGFEVDLIHKLC 62
           M  WL +  L+    +G + A E K + F +    YPPF+    +G   GF+VD+ + LC
Sbjct: 3   MKKWLVATALIATTISGVTQAKEWKTVRFGIEGA-YPPFSWTEADGSLKGFDVDMANALC 61

Query: 63  EGMKAECQIKEVAWDGIIPSLLAKKIDVIFSSMSVTDEREKQIAFSRAYYDSLLGVAGPK 122
             M+ EC+I    WDGIIPSLLA+K D I ++MS+T+ER+K++ F+  Y          K
Sbjct: 62  AEMQVECKIVPQDWDGIIPSLLARKYDAIIAAMSITEERKKKVDFTGKYAQIPNKFIAKK 121

Query: 123 GSEVEISPAGLKGKLIGVQISTVSANYLKKYYENIADLKYYDTQESANADLIAGRIDYMM 182
           G+++  +  GLKG  IGVQ +T    Y+   Y +  D+  Y + + A  DL  GRI  ++
Sbjct: 122 GADLAFTKEGLKGVKIGVQRATTHDKYITDNYGDTVDIVRYGSFDEAYLDLANGRIAAVL 181

Query: 183 ADDTAIAM-MVKTPEASGLAHIASVPYDP-IIGRGVGAGLRKEDTALKARLDKAIGELLV 240
            D +A+   M+  P       +     DP   G G+G  +RK+D  L  +LD AI  L  
Sbjct: 182 GDASALEEGMLNKPGGDAYEFVGPSLTDPKWFGEGMGIAVRKQDKELTEKLDAAITALRE 241

Query: 241 SKDYDDLSQHYFGLSV 256
              Y  +   YF   V
Sbjct: 242 KGIYQQIQAKYFKYDV 257