Pairwise Alignments

Query, 751 a.a., ATP-dependent DNA helicase from Pseudomonas simiae WCS417

Subject, 691 a.a., ATP-dependent DNA helicase DinG from Vibrio cholerae E7946 ATCC 55056

 Score = 45.1 bits (105), Expect = 1e-08
 Identities = 42/166 (25%), Positives = 78/166 (46%), Gaps = 10/166 (6%)

Query: 588 YTQQPGNYLAFFSSFDYLQQVAQLLAEKHPTITLWQQSRGMAEAERQAFLDQFTEHSQGI 647
           Y Q     L  F+S+  +++VA+ L  +        Q +G  E  R   L++  +  +  
Sbjct: 521 YLQADKANLVLFASYWQMREVAESLKVEFTKRGWALQVQG--EKSRSEILNKHKKLIEKQ 578

Query: 648 GFAVL--GGAFGEGIDLPGARLIGAFIATLGLP-QLNPVNEQMKLRMGAIFGAGYDYTYL 704
             +VL   G+F EG+DLPG  L    I  +      +PV +     +  + G  +    +
Sbjct: 579 KTSVLFGTGSFSEGLDLPGELLENLIITKIPFAVPTSPVEQAHAEYIQELGGNPFMQITV 638

Query: 705 YPGIQKVVQAAGRVIRSQQDQGVVMLID-----DRFGEARVRQLLP 745
               +K++Q+ GR++R ++D G V+++D      R+G+A +  L P
Sbjct: 639 PEASKKLIQSVGRLLRKERDSGRVVILDRRVVSKRYGKALLDALPP 684



 Score = 27.7 bits (60), Expect = 0.002
 Identities = 45/214 (21%), Positives = 81/214 (37%), Gaps = 34/214 (15%)

Query: 204 LMAQAPTGIGKTIGTIFPLLKALAPQRLDKLFFLTAKTPGRKLALDAAQVLHASSPDQPL 263
           L+A+A TGIGK++  +  ++  +A     K+   TA    ++  L+    L+    DQ  
Sbjct: 52  LVAEAGTGIGKSLSYLMAVI-PVAVVNKRKVVISTATVALQEQLLNKDLPLYRRISDQNF 110

Query: 264 RVLELVARDKAC--EHLDKACHGDACPLAKGFYDRLP-------AARIAAA--------- 305
             +    R + C  E L  AC  D   +A   ++  P        A +  A         
Sbjct: 111 SFILAKGRQRYCCSERLAAACGIDDGQIA--LFESKPKPHETELLAELHTALSQGKWDGD 168

Query: 306 -------------KVRLLDQRNLRDVALAHDVCPYYLSQEMARWADLVVADYNYYFDFGA 352
                         V + D+ +       H  CP+  ++     AD+++A+++       
Sbjct: 169 RDGWPSPISDELWSVIVSDKHSCNGSFSVHRHCPFQKARSELDKADVIIANHSLVMADAD 228

Query: 353 MLFGLAQLNQWRAAVLVDEAHNLVERARSMYSAS 386
           +  G+          + DEAH+L   AR   SA+
Sbjct: 229 LGGGVILPAPEETIYVFDEAHHLPTVAREHASAA 262