Pairwise Alignments

Query, 751 a.a., ATP-dependent DNA helicase from Pseudomonas simiae WCS417

Subject, 775 a.a., DEAD_2 from Pseudomonas syringae pv. syringae B728a

 Score = 1119 bits (2895), Expect = 0.0
 Identities = 545/746 (73%), Positives = 629/746 (84%)

Query: 3   YSVAVRALCEFTAKVGDLDLRFTPSPSAQEGIIGHRTVASRRSAHYQNEVALEGEYQQLK 62
           Y VAVRALCEFTAKVGDLDLRFTPSP+AQEGI GHRTVA+RR A YQ E++L G+Y++L 
Sbjct: 23  YVVAVRALCEFTAKVGDLDLRFTPSPTAQEGIAGHRTVAARRGADYQAELSLSGDYRELT 82

Query: 63  VRGRADGYDPDANRLEEVKTYRGDLDAQPANHRQLHWAQVKVYGWLMCQKLNLSHINLAL 122
           VRGRADGYD   N+LEEVKTYRG+LDA PANHRQLHWAQVKVYGWL+CQ+L L  + LAL
Sbjct: 83  VRGRADGYDASRNQLEEVKTYRGELDAMPANHRQLHWAQVKVYGWLLCQRLQLEEVTLAL 142

Query: 123 VYFDIVGEGETVLNQRFQAAELEPFFNQQCALFLGWAQQEMAHREARNSAAQTLAFPHAG 182
           VYF+IV E ET++ + F A  L+ FF +QC +FLGWAQQE+AH +A ++   +L FPHA 
Sbjct: 143 VYFNIVSEQETLIREPFSAPTLQAFFERQCTIFLGWAQQELAHTQALHTTLGSLKFPHAS 202

Query: 183 FRPGQRSLAESVYKAVSTGRCLMAQAPTGIGKTIGTIFPLLKALAPQRLDKLFFLTAKTP 242
           FR GQR LAESVYKAVSTG CLMAQAPTGIGKT+GT+FPLLKA   Q+LDK+FFLTAKTP
Sbjct: 203 FRTGQRVLAESVYKAVSTGCCLMAQAPTGIGKTVGTLFPLLKAAPGQKLDKIFFLTAKTP 262

Query: 243 GRKLALDAAQVLHASSPDQPLRVLELVARDKACEHLDKACHGDACPLAKGFYDRLPAARI 302
           GR+LALDA +V++ S+P+  LRVLELVARDKACEH DKAC+GD+CPLA GFYDRLPAAR 
Sbjct: 263 GRRLALDALKVINHSAPELKLRVLELVARDKACEHPDKACNGDSCPLASGFYDRLPAARS 322

Query: 303 AAAKVRLLDQRNLRDVALAHDVCPYYLSQEMARWADLVVADYNYYFDFGAMLFGLAQLNQ 362
           AA     L+Q  +RDVAL H VCPYYLSQE+ARWAD+V+ADYNYYFD  A+LFGL QLNQ
Sbjct: 323 AALTSPWLNQAGVRDVALQHQVCPYYLSQELARWADVVIADYNYYFDLSALLFGLGQLNQ 382

Query: 363 WRAAVLVDEAHNLVERARSMYSASLDQYHLKTLRETAPEPLKQPLQRLNRAWNALHKDQL 422
           WR AVLVDEAHN+VERAR MYSASLDQ  LK L +TAPEP+K+ LQRL+R WNALHK Q 
Sbjct: 383 WRVAVLVDEAHNMVERARQMYSASLDQSQLKALIQTAPEPVKKALQRLDRQWNALHKAQP 442

Query: 423 APYQAYTARPEKLLQALSLCASAMGEYFNDHPESLSGDLQRFYFEVLQFGKVAELFNEHF 482
             YQAY+A PEK + +L+   S +G++FN+HP+++ G LQ FY + + F ++AELF+EHF
Sbjct: 443 GTYQAYSAAPEKFIGSLNQSISTIGDHFNEHPQAVDGTLQGFYLDAIGFARIAELFDEHF 502

Query: 483 IFDISKRQLNGKRSSSTLCLRNVVPAEFIRPRLTAARSSVLFSATLSPRHYYADLLGLPA 542
           IFDI++R+  GKR  S L LRNVVPA FIRPRLTAARS+VLFSATL+PRHYYADLLGLPA
Sbjct: 503 IFDITRREAGGKRVLSRLSLRNVVPARFIRPRLTAARSTVLFSATLNPRHYYADLLGLPA 562

Query: 543 DTAWIDVESPFKAEQLHVRIVDEISTRFVHRHASLEPIVELIARQYTQQPGNYLAFFSSF 602
           +TAWIDVESPF  +QL VRIV  ISTRF HR ASL PIVEL+A+Q+  +PGNYLAFFSSF
Sbjct: 563 NTAWIDVESPFHHDQLDVRIVSRISTRFTHRQASLAPIVELMAKQFDARPGNYLAFFSSF 622

Query: 603 DYLQQVAQLLAEKHPTITLWQQSRGMAEAERQAFLDQFTEHSQGIGFAVLGGAFGEGIDL 662
           DYLQQVA+L+A  HP I+LW Q+RGM E+ER AFLD+FT  SQGIGFAVLGGAFGEGIDL
Sbjct: 623 DYLQQVAELMARTHPHISLWLQARGMGESERHAFLDRFTLSSQGIGFAVLGGAFGEGIDL 682

Query: 663 PGARLIGAFIATLGLPQLNPVNEQMKLRMGAIFGAGYDYTYLYPGIQKVVQAAGRVIRSQ 722
           PGARLIGAFIATLGLPQLNPVNEQ K RM A+FGAGYDYTYLYPG+QKVVQAAGRVIRSQ
Sbjct: 683 PGARLIGAFIATLGLPQLNPVNEQFKQRMAALFGAGYDYTYLYPGVQKVVQAAGRVIRSQ 742

Query: 723 QDQGVVMLIDDRFGEARVRQLLPRWW 748
            D GVVMLIDDRF E +V+QL P WW
Sbjct: 743 SDSGVVMLIDDRFAEHKVKQLFPAWW 768