Pairwise Alignments

Query, 751 a.a., ATP-dependent DNA helicase from Pseudomonas simiae WCS417

Subject, 633 a.a., ATP-dependent helicase, DinG family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 55.5 bits (132), Expect = 9e-12
 Identities = 109/459 (23%), Positives = 190/459 (41%), Gaps = 54/459 (11%)

Query: 322 HDVCPYYLSQEMARWADLVVADYNYYFDFGAML-FGLAQLNQWRAAVLVDEAHNLVERAR 380
           +D C    ++  A  A ++V +++ +F    +   G A+L      V+ DEAH L +   
Sbjct: 176 YDACFTRKARSRAMDAKIIVVNHHLFFADSVLKDTGFAELLPDPDVVIFDEAHLLPDICV 235

Query: 381 SMY-----SASLDQYHLKTLRETAPEP---------LKQPLQRLNRAWNALHKDQLAPYQ 426
           S +     S ++D Y  K L+    E           ++ L +L+   N L     + ++
Sbjct: 236 SYFGQQSSSRTIDDYLQKLLQIYQTELSDTGQIAQFCQRCLAKLSDWHNGLFSIAESDWR 295

Query: 427 AYTARPEKLLQALSLCA--SAMGEYFNDHP--ESLSGDLQRFYFEVLQFGKVAELFNEHF 482
                    L +  L A  +A+ +    H     L  D+       ++  ++    N  F
Sbjct: 296 VLLGNKSIALASWDLLAELTALQKLLLAHVGRSELLDDI------AVKLAELNHKLNHFF 349

Query: 483 IFDISKRQLNGKRSSSTLCLRNVVPAEFIRP--RLTAARSSVLF-SATLSPRH---YYAD 536
             D  +   + +  S  + LR + P    R   +L  A +S +F SATL       ++A 
Sbjct: 350 QCDNPQAAYSVEFGSRFVMLR-ISPINIARECQQLFVANTSWIFTSATLQVNRSLAHFAK 408

Query: 537 LLGLPADTAWIDVESPFKAEQLHVRIVDEISTRFVHRHASLEPIVELIARQYTQQPGNYL 596
            LG+    A I ++SPF   +  +  V        ++  +L+ +V++  +      G   
Sbjct: 409 ELGISDAKAHI-LDSPFDYPRQALFCVPRQLGNVANQQQALKQLVDVCVKAIEAAQGRTF 467

Query: 597 AFFSSFDYLQQVAQLLAEKHPTITLWQQSRGMAEAERQAFLDQFTEHSQGIGFAVLGG-- 654
             F+S   L+Q A  L  +     L Q      +A +Q+ L +F +    +G AVL G  
Sbjct: 468 ILFTSHKMLEQTALALRTRTQYPLLVQ-----GQAGKQSLLTKFRQ----LGNAVLLGTS 518

Query: 655 AFGEGIDLPGARLIGAFIATLGLPQLNPVNEQMKLRMGAIFGAGYD---YTYLYPGIQKV 711
           +F EG+D+ G  L    I  L  P ++P     + R   I   G D      L   I  +
Sbjct: 519 SFWEGVDVRGKLLSCVIIDKL--PFVSPDEPLYRARADNISRQGGDPFTQVSLPQAIIAL 576

Query: 712 VQAAGRVIRSQQDQGVVMLIDDR-----FGEARVRQLLP 745
            Q  GR+IR ++D GV++L D+R     +G+A +  L P
Sbjct: 577 KQGVGRLIRDEKDCGVLILCDNRIVNRAYGQAFLNSLPP 615